Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20xenobiotica_20[genbank_20GCA_5F000835505.1_202015-02-23] 15 sequences; 31,405,760 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq3 123 2e-23 seq6 98.7 9e-16 seq7 82.4 7e-11 >seq3 Length=5039080 Score = 123 bits (136), Expect = 2e-23 Identities = 168/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || ||| || ||||| ||||| ||||||||| Sbjct 2338742 CCACCACGGAGACGGAGAACAAGGTGGAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAG 2338801 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| ||||| |||||||||||||| ||||| || |||||||| | ||| Sbjct 2338802 AGGGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGACGTTGTTGGTCAGGAGGA 2338861 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | || |||||| ||| ||| | || | |||| ||| | | | ||||| || || | Sbjct 2338862 ATGCCCTCCTTATCC-TGAATCTTGGACTTC-ACGTTGTCGATGGTGTCTGAAGATTCGA 2338919 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || || || || || || || ||||| || || || ||||| Sbjct 2338920 CCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATTTGCAT 2338968 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || ||||| | |||| |||| || ||||||||||||||| |||||| Sbjct 2338970 CCGCCACGAAGACGAAGAACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAGTCGCTC 2339029 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || |||||||| || ||||| || ||||||||||| || | |||| Sbjct 2339030 AGAGTGCGGCCATCTTCAAGCTGCTTACCAGCGAAGATGAGGCGCTGTTGATCGGGGGGA 2339089 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || ||||||||| ||| || |||| ||| | | | || ||||| || || || Sbjct 2339090 ATGCCTTCCTTGTCCTGGATCTTGGACTTC-ACGTTGTCGATGGTATCGCTGGATTCGAC 2339148 Query 41815 CTCCACCGTTATCGTTTTACCCGT 41838 ||| | || || || || || || Sbjct 2339149 CTCAAGGGTGATGGTCTTGCCGGT 2339172 >seq6 Length=3773453 Score = 98.7 bits (108), Expect = 9e-16 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||||||||| |||||||| || ||||| | || ||||| |||||||||||||| Sbjct 232542 CTCCTTCTGAATGTTGTAGTCGGAAAGAGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAA 232483 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTC 41769 ||||| || |||||||| | |||| | |||||||| Sbjct 232482 GATCAGACGTTGTTGGTCAGGAGGAATTCCTTCCTTGTC 232444 >seq7 Length=3649802 Score = 82.4 bits (90), Expect = 7e-11 Identities = 129/182 (71%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 |||| || ||||| |||||| ||||| || | || ||||| ||||| |||||||| | Sbjct 2466056 CCTTTTGGATGTTGTAGTCGCTCAGGGTTCGGCCATCCTCGAGTTGCTTTCCGGCGAAAA 2466115 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792 ||| |||||||| || | || | | |||||||| ||| || ||| | || | Sbjct 2466116 TCAATCGCTGTTGATCGGGAGGGATTCCTTCCTTGTCTTGGATCTTGGACTTGA-CGTTG 2466174 Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 | | |||||| ||||||||||| | || || || || ||||| || ||||| ||| Sbjct 2466175 TCGATGGTGTCGGATGACTCCACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACG 2466234 Query 41852 AA 41853 || Sbjct 2466235 AA 2466236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303913318000