Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq50 93.3 9e-14 seq185 89.7 1e-12 seq3 86.0 1e-11 >seq50 Length=290317 Score = 93.3 bits (102), Expect = 9e-14 Identities = 132/186 (71%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 230452 GGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTT 230511 || |||||| | | || ||| ||||||||||| || || || |||||| | | ||| Sbjct 113437 GGTATGAACTCGAACCTCATGAAGCAGTACATCGAGTTTGTGGCAGACCGCCTCCTGGTT 113496 Query 230512 GCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATT 230571 || || || |||| || || ||| | | |||||||| | || |||||| ||| Sbjct 113497 GCTCTCGGCAACGACAAGGTCTACCGCGCATCCAACCCCTTCGATTTCATGGAGAACATC 113556 Query 230572 TCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGT 230631 || || || ||||||||||||||||| ||||| || | || || |||| | ||||| Sbjct 113557 TCCCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGCGTGGGCGAGTACCAGAAGGCTGGT 113616 Query 230632 GTGATG 230637 || ||| Sbjct 113617 GTCATG 113622 >seq185 Length=1179 Score = 89.7 bits (98), Expect = 1e-12 Identities = 124/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 319857 GGGGAACCCTTCAAGCTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCC 319916 |||||| || || | ||| |||| || |||||||| ||||| || || |||| || Sbjct 535 GGGGAAACCCTCGACCTGCTCGTTGTTGATGGCGCGCATGAGGGTCGACTTGCCCGAACC 594 Query 319917 GTTTGGCCCACACAGACCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAG 319976 ||| || || |||||||||||||| | || || |||||| || |||| | |||||| Sbjct 595 GTTGGGACCGCACAGACCGTAGCGCTGGCCACGCTTCAGGCGGAGGTGCGTCTGGTTCAG 654 Query 319977 AAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030 || || || |||| || || || || || || | ||||| |||||||| Sbjct 655 CAGGATCTTGGCACCGTAGGCGAGGGAGAAGGTGCAGTTGCACAGGTCCTCACC 708 >seq3 Length=2538176 Score = 86.0 bits (94), Expect = 1e-11 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 281817 CAGTTAATGTTATTGCTCCCGACGTAATCCTGAGCCAGGTTGACGATTGTCCCCTGAAGC 281876 ||||| | ||| ||| |||||| | | |||||||||| || || ||| ||| ||| Sbjct 2102160 CAGTTCACGTTGTTGGACCCGACAAAGTTCTGAGCCAGGCCGATAATGGTCTGCTGTAGC 2102219 Query 281877 GATACCTCACCGTGGTGATAGGCGCTGTGTTCGGCAACATAACCACTGAACTGTGCTACC 281936 || |||||||||||||| |||||| ||||| | || |||||| |||| | ||| Sbjct 2102220 GAGACCTCACCGTGGTGGTAGGCGGCCTGTTCCGAGACGTAACCAGCCAACTCGACGACC 2102279 Query 281937 TTCACGTCTGATGTCAAGTTGCGTTTGAAA 281966 ||| |||| | || ||| ||||||||| Sbjct 2102280 TTCTTGTCTTTTACCAGGTTCCGTTTGAAA 2102309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057820652317610