Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq50 82.4 8e-11 >seq50 Length=290317 Score = 82.4 bits (90), Expect = 8e-11 Identities = 131/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || || ||||| || || ||| | || ||||| ||||||||||| |||||| Sbjct 112544 ATGTAGGTGTCGATCAGGAGCGAGTAGGTCTCAGAGTGGATGTTCTCCATCATGATCTGA 112485 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 |||||||| ||||| ||||| || | | || ||||| || ||| || ||| | | Sbjct 112484 AATCCGTAGAAGCAACGGGCCTCGGGAACCTGGACTTCGCCGCTGAAGCGCTCCACCAAG 112425 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413 || ||||| |||||||| || ||||| || || || | ||||| ||||| || Sbjct 112424 TTCTCGTTGACGATGCCATCCGAGGCGGCAAAGAAGGCGAGGATATGTGAGATGAAGTAC 112365 Query 17414 TTTTCGTC 17421 || || || Sbjct 112364 TTCTCATC 112357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517544002077960