Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq2 165 1e-35 >seq2 Length=2981670 Score = 165 bits (182), Expect = 1e-35 Identities = 236/329 (72%), Gaps = 19/329 (6%) Strand=Plus/Plus Query 145540 ACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCC 145599 |||| ||||| ||||| ||||||| ||| |||| ||| |||| | | |||||||| Sbjct 1776684 ACCGACATCTTCATGGCGATGGCCTTGTGTGGGTCGTATCCCTTGACGACGAAGTCCTCA 1776743 Query 145600 GCCCTGAAGTCATCTATGTCC---TCCAC--CCGCCTCAGG----------ATCCTGAGC 145644 | | || | || |||| | ||| | ||| ||| || ||| ||| Sbjct 1776744 AGCTTCCAGCCGTCGATGTTCCCGTCCCCGACCGTCTCGGGCGGACGGGCGATCTCGAGG 1776803 Query 145645 -CTGGGAAAGGGCCGGGGGCTCCTGGTC-AGCTGGAGCTTCAGGGGCTCCACGTGGTTGA 145702 | ||||| |||| ||||||| | || |||||| ||||| || ||||||| || Sbjct 1776804 TCCGGGAAGGGGC--GGGGCTCGCGCTCGAGCTGGGTGCGCAGGGCGTCGACGTGGTCGA 1776861 Query 145703 GGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGT 145762 ||||||||| ||||| |||| ||||||| | | ||||||| ||||| | | || Sbjct 1776862 CGTAGACGTGGGCGTCGCCCATGACGTGGGTCAGCGACCCGGGCACGAGGTCGCAGGCGT 1776921 Query 145763 GGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCA 145822 |||||| ||||| |||||||| |||||||| || |||||||||||||| ||||| |||| Sbjct 1776922 GGGCGAGCATGTGCGTCAGCAGCGAGTAGCTCGCGATGTTGAAGGGCACGCCCAGGCCCA 1776981 Query 145823 TGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851 |||| | || |||||||| ||||||||| Sbjct 1776982 TGTCGCAGGACCGCTGGTAGAGCTGGCAG 1777010 Score = 149 bits (164), Expect = 7e-31 Identities = 210/291 (72%), Gaps = 8/291 (3%) Strand=Plus/Plus Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGG 145929 |||||||||||| | | |||||||||||||||| ||||| | ||| ||| |||| Sbjct 1777173 ACGTAGAACTGGGCAAACATGTGGCAGGGCGGCAGGACCATGAGGTGCATGTCGCGCGGG 1777232 Query 145930 TTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCG---GGGTTCCTCTTG-ATCTCCCCTAT 145985 ||||||||| |||||| || | | || || |||||| || | | || | | Sbjct 1777233 TTCCAGGCGCTGAGGATGA---TGCGGCGGTCAAACGGGTTC-TCGCGCAGCTTGCGCAC 1777288 Query 145986 CAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGC 146045 | || ||||||||| |||||||| || | ||| || ||||| | |||| |||| | Sbjct 1777289 GACCTCGGCGAGCTGGTCGACGCCCTGTCCGCTGTAGTCGGTCTTTGCGTCCTTGTACTC 1777348 Query 146046 GGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTG 146105 ||| || ||||| | ||||||||| ||||||||||| || ||||| ||| || | ||| Sbjct 1777349 GGCGCCAAAGTGGCGCCACTGGAAGCCGTAGACGGGGCCGAGGTCGCCGACGTCGCGGTG 1777408 Query 146106 CCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGAT 146156 ||| || | | ||||||| || || ||||||||| |||||||||| Sbjct 1777409 GTGCAGGCCCAGCGAGTCGAGGAACTCGCGCGACCCGTTGCCGTCCCAGAT 1777459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590074978137880