Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq48 98.7 1e-15 >seq48 Length=300044 Score = 98.7 bits (108), Expect = 1e-15 Identities = 433/682 (63%), Gaps = 10/682 (1%) Strand=Plus/Plus Query 63234 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63293 || ||||| | || ||| || |||| | || || || ||||| || || || || ||| Sbjct 143552 GGGCACATGAGCGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATGAACAGGTCCGGGATC 143611 Query 63294 CAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 63353 || || || | || || || | | | ||||| || || ||||| || Sbjct 143612 CACAGGGCCAGGAAGAGGTCGCGGGCGCGGATCTCCTCCTTGCCGTGGTTCTTGCGCAGG 143671 Query 63354 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 63413 ||||||||| | | | || | ||||| || |||| ||| ||||| | | | || || Sbjct 143672 TCGAGGAACTCGAACACGTCGGCGTGCCATGGCTCCAGGTAGATGGCAAAAGCGCCGGGG 143731 Query 63414 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 63473 || ||||| || ||||| || | || | || ||||| ||| |||| | || ||| || Sbjct 143732 CGCTTGTTGCCACCCTGGTCGACATAGCGTGCCGTGTTGTTAAAAACACGCAGCATGGGC 143791 Query 63474 ATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTA 63533 | || || || || | || ||||| |||| ||| ||| || |||||||||| Sbjct 143792 ACGATGCCATTGGAGGTGCCGTTGGTGCCGGCGATGTAGGAGCCCGTGGCACGAATGCGG 143851 Query 63534 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTG 63593 || || || || || || ||||| || || || | || || || | ||| Sbjct 143852 TGGATGTTGAGGCCGATACCACCGGCCATCTTGGAAATCATGGCACAGGTCTTGAGGGTG 143911 Query 63594 TCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGG 63653 || ||||| || || ||||| || || |||||| | || || || |||| ||| Sbjct 143912 TCGTAGATACCATCGATGCTGTCGTCCTTCATGTCGACGAGGAAGCACGATGACAGCTGG 143971 Query 63654 TGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAA 63713 | | ||| || || || || | || || || ||||| || || | || || Sbjct 143972 GCCTGGGGAGTGCCGGCGTTGAAGAGAGTGGGTGAGGCGTGGGTGAAGTACTTGCTCGAC 144031 Query 63714 AGTAGATTGTACGTCT----CAATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTG 63768 | || |||||||||| || ||| | | | | || || |||| || || | Sbjct 144032 ATGAGGTTGTACGTCTCGAGCACGCGCTCAATGT-TGTCGCCCCAGATG----CCGACAG 144086 Query 63769 CGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGT 63828 |||||||||| | ||||||||| || | || || || ||| || | || | || || Sbjct 144087 CGACACGCATGATCATGTGCTGGGGGCGCTCGACGATCTTGCCGTCGAGCTTGAGCAGGT 144146 Query 63829 AGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAA 63888 | || |||| || || || ||||| || | ||| ||||| || || || | | Sbjct 144147 ACGAGCGCTCCAGGGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCCCGGTCATAGACGA 144206 Query 63889 TAACCGAATTGAGCTTATCCTT 63910 | |||| | || || ||||| Sbjct 144207 TGGCCGAGTCGAACTCGTCCTT 144228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629815655438160