Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq2 98.7 8e-16 >seq2 Length=2981670 Score = 98.7 bits (108), Expect = 8e-16 Identities = 126/171 (74%), Gaps = 2/171 (1%) Strand=Plus/Plus Query 20923 GCAGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTC 20982 |||||| || ||||||| | ||| ||||||||||| |||| | ||| | | | Sbjct 1776841 GCAGGGCGTCGACGTGGTCGACGTAGACGTGGGCGTCGCCCATGACGTGGGTCA-GCGAC 1776899 Query 20983 CCGGGGTC-AGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATG 21041 ||||| | ||| | | |||| |||| || | |||||| || | |||||| |||||| Sbjct 1776900 CCGGGCACGAGGTCGCAGGCGTGGGCGAGCATGTGCGTCAGCAGCGAGTAGCTCGCGATG 1776959 Query 21042 TTAAACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAG 21092 || || || || || |||||||||||| ||||| |||||| ||||||||| Sbjct 1776960 TTGAAGGGCACGCCCAGGCCCATGTCGCAGGACCGCTGGTAGAGCTGGCAG 1777010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427774712260560