Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq42 100 2e-16 >seq42 Length=391249 Score = 100 bits (110), Expect = 2e-16 Identities = 134/181 (74%), Gaps = 4/181 (2%) Strand=Plus/Minus Query 33541 GTCAAGATCAAGCTGCGCAAGATACGCATACCAGAGATGGGCGACAAGTTTGCATCGTTC 33600 |||||| || || |||| ||| ||| || ||| ||||||||||||| | ||| | Sbjct 11111 GTCAAGGTCCAGACGCGCCAGACGCGCCGCCCCGAGCTGGGCGACAAGTTCTCGTCGCGC 11052 Query 33601 -ACGGCCCAGAAGGGCA-CGTGCGGCATGATGTACGACCAGTGGGACATGCCGTTCACGG 33658 |||||| | |||||| ||| |||||| || ||||||| ||||||||||||| || Sbjct 11051 CACGGCCAA-AAGGGCGTCGT-CGGCATCATCGTCGACCAGGAGGACATGCCGTTCCAGG 10994 Query 33659 CCGACGGCGTGGTCCCGGACCTAGTCATCAACCCGCATGCGTTCCCCTCGCGCATGACGG 33718 | ||| |||| || ||| | |||| |||||||| | |||||||| || ||||||| Sbjct 10993 ACTCAGGCCTGGTGCCCGACATCATCATGAACCCGCACGGTTTCCCCTCCCGAATGACGG 10934 Query 33719 T 33719 | Sbjct 10933 T 10933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356232527625541