Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq48 122 1e-22 >seq48 Length=300044 Score = 122 bits (134), Expect = 1e-22 Identities = 441/687 (64%), Gaps = 10/687 (1%) Strand=Plus/Plus Query 79891 CCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATA 79950 || || || |||| || ||||| | || ||| || || | | || || || ||||| Sbjct 143537 CCGGGGCACTCGTTGGGGCACATGAGCGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATG 143596 Query 79951 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCT 80010 || || || || ||||| || || | || || || | || | |||||| || || Sbjct 143597 AACAGGTCCGGGATCCACAGGGCCAGGAAGAGGTCGCGGGCGCGGATCTCCTCCTTGCCG 143656 Query 80011 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 80070 ||||| || ||||||||| | | | || | ||||| || |||| ||| ||| Sbjct 143657 TGGTTCTTGCGCAGGTCGAGGAACTCGAACACGTCGGCGTGCCATGGCTCCAGGTAGATG 143716 Query 80071 GCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 80130 || | | | || || || ||||| || ||||| || | || | || ||||| ||| || Sbjct 143717 GCAAAAGCGCCGGGGCGCTTGTTGCCACCCTGGTCGACATAGCGTGCCGTGTTGTTAAAA 143776 Query 80131 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCA 80190 || | || ||| || | || |||||||| || || ||||| |||| ||| ||| || Sbjct 143777 ACACGCAGCATGGGCACGATGCCATTGGAGGTGCCGTTGGTGCCGGCGATGTAGGAGCCC 143836 Query 80191 CTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 80250 |||||||||| || || || || || || ||||| || || || | || Sbjct 143837 GTGGCACGAATGCGGTGGATGTTGAGGCCGATACCACCGGCCATCTTGGAAATCATGGCA 143896 Query 80251 CATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAA 80310 || || | || || ||||| || || ||||| || || |||||| | || || Sbjct 143897 CAGGTCTTGAGGGTGTCGTAGATACCATCGATGCTGTCGTCCTTCATGTCGACGAGGAAG 143956 Query 80311 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 80370 || |||| ||| | ||| || || || || | || || || ||||| || Sbjct 143957 CACGATGACAGCTGGGCCTGGGGAGTGCCGGCGTTGAAGAGAGTGGGTGAGGCGTGGGTG 144016 Query 80371 AACCATTTTTCAGACAGTAGATTGTACGTCT----CAATAGCTGATTCTATATC-CCATT 80425 || | || |||| || |||||||||| || ||| | | | | || || Sbjct 144017 AAGTACTTGCTCGACATGAGGTTGTACGTCTCGAGCACGCGCTCAATGT-TGTCGCCCCA 144075 Query 80426 GATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTAT 80485 |||| || || ||||||||||| | ||||||||| || | || ||||||||| | Sbjct 144076 GATG----CCGACAGCGACACGCATGATCATGTGCTGGGGGCGCTCGACGATCTTGCCGT 144131 Query 80486 TTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGT 80545 | || | || ||| || |||| || || || ||||| || | ||| |||| Sbjct 144132 CGAGCTTGAGCAGGTACGAGCGCTCCAGGGTCTTGAAGCCAAAGTACTGGTAGTTGAAGT 144191 Query 80546 CTCGTTCGTAAATAATAACCGAGTTGA 80572 | || || || | || |||||| || Sbjct 144192 CCCGGTCATAGACGATGGCCGAGTCGA 144218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718266582345080