Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 5e-11 >seq1 Length=4491949 Score = 82.4 bits (90), Expect = 5e-11 Identities = 136/194 (70%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 33178 CTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAA 33237 ||| || || || |||||||| |||| || | || |||| ||||| || ||| Sbjct 3513587 CTCCTTCTGGATGTTGTAATCCGACAGGGTGCGACCATCCTCCAGCTGCTTGCCCGCAAA 3513528 Query 33238 TATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGT 33297 || |||||||||||||||| ||| ||||| || || || |||| || || | Sbjct 3513527 GATCAAACGTTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTGCTCTTGACGTT 3513468 Query 33298 TTGAATCGTGTC-GTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTA 33356 | ||||||||| | || | | || ||||| || || || || || |||||||| || | Sbjct 3513467 GTCAATCGTGTCTGATGACTCG-ACTTCCAGCGTGATGGTCTTGCCGGTAAGAGTCTTGA 3513409 Query 33357 CGAAAATTTGCATG 33370 |||| || |||||| Sbjct 3513408 CGAAGATCTGCATG 3513395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318776640379806