Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq1 114 3e-20 >seq1 Length=4491949 Score = 114 bits (126), Expect = 3e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || |||||||| || ||||| || ||||| | ||| || || ||||| ||||||||||| Sbjct 3513358 TCCTTCTGAATGTTGTAGTCGGAAAGAGTCCGACCATCCTCGAGTTGCTTTCCAGCAAAG 3513299 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || || | ||| || || || || || || || || ||||||||||| | || ||||| Sbjct 3513298 ATCAGGCGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGAATCTTCGACTTGACATTG 3513239 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | ||| || || || ||||| | || |||||||| || || || || || || Sbjct 3513238 TCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATAGTCTTGCCCGTCAGGGTCTTGACG 3513179 Query 104549 AATATCTGCAT 104559 || || ||||| Sbjct 3513178 AAGATTTGCAT 3513168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151394756183876