Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq6 136 3e-27 >seq6 Length=1553417 Score = 136 bits (150), Expect = 3e-27 Identities = 134/173 (77%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 5581 GCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCC 5640 ||||||| || ||||| || | || |||||| || |||| ||| ||| || | | Sbjct 1406962 GCGCTCGACGACGAGCTGGGCGACGCGCTCGCCCTCCTCGACCTTGAAGTCGGCGTCGGC 1406903 Query 5641 GAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCC 5700 | |||||| |||| ||| || | |||||||||||||||||| || ||||||||||| Sbjct 1406902 GTGGTTGAAGAGCAGCACCTTGACCTGGCCGCGGTAGTCGGCGTCGATGACGCCCGCGCC 1406843 Query 5701 CACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGT 5753 | |||||||||||||||| |||| |||||||| ||||| || | |||||||| Sbjct 1406842 CGTGTCGATGAAGTGCTTGGCCGCGAGGCCGGACCGGGGCGCGATGCGGCCGT 1406790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430053105401864