Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq50 82.4 1e-10 >seq50 Length=290317 Score = 82.4 bits (90), Expect = 1e-10 Identities = 175/258 (68%), Gaps = 5/258 (2%) Strand=Plus/Minus Query 33601 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 33660 || || || ||||| || || ||||||||||||||||| || | ||||||| || | Sbjct 112514 TCAGAGTGGATGTTCTCCATCATGATCTGAAATCCGTAGAAGCAACGGGCCTCGGGAACC 112455 Query 33661 TGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33720 || ||||| | || || ||| |||| || || || || || || || ||| ||| Sbjct 112454 TGGACTTCGCCGCTGAAGCGCTCCACCAAGTTCTCGTTGACGATGCCATCCGAGGCGGCA 112395 Query 33721 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC-TGGTGTTAG---TTTATTCCA 33776 || || || | | |||| || || || || || || | || | || || ||||| Sbjct 112394 AAGAAGGCGAGGATATGTGAGATGAAGTACTTCTCATCGTCGT-TGAGCTTGTTGTTCCA 112336 Query 33777 ATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 33836 || | || || || || | || | || || ||||||| || || ||||| ||||| Sbjct 112335 GTCGTGGAGGTCCTTGGACAGGTCGATCTCCTCGGCTGTCCAGAACGAGGCCTCGGCCTT 112276 Query 33837 TTTATACATGTTCCAGAT 33854 || ||||| | |||||| Sbjct 112275 CTTGTACATCTGCCAGAT 112258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622945276650520