Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq50 87.8 2e-12 >seq50 Length=290317 Score = 87.8 bits (96), Expect = 2e-12 Identities = 240/366 (66%), Gaps = 15/366 (4%) Strand=Plus/Minus Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701 || |||||||||||| || || || || || || |||||||| | || || ||||| | Sbjct 113607 CTGGTACTCGCCCACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGGGAGATGTTCTC 113548 Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761 ||| || ||||| || || | | | | | |||||||| ||| | | | || || Sbjct 113547 CATGAAATCGAAGGGGTTGGATGCGCGGTAGACCTTGTCGTTGCCGAGAGCAACCAGGAG 113488 Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACATGGATTGCGAATTCATGCCCAACATAGC 119821 || |||||||||||||||||||| | |||| | ||| ||||| || | || ||| Sbjct 113487 GCGGTCTGCCACAAACTCGATGTACTGCTTCATGAGGTTCGAGTTCATACCGAGCAGAGC 113428 Query 119822 GACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTCTACAAACATACT 119881 ||| | || | ||| | ||| || | || || | ||| || || || | || || Sbjct 113427 ACACGGCAGGGCCTCGGTCAGGAACTCTTGCTCGATCTTGACGGCATCGACGATGAT-CT 113369 Query 119882 CAAC-ACCTTGGTCTTGGAGAGCTTGTTCTT--TTCGGGAATATATTTATTGTAGTATAG 119938 | | | | | |||| | || ||||||| | |||| | || || Sbjct 113368 CCTCGATCATTTGCTTGCTGGGCCTGTTCTTCATGTGGGA-----------GAAGAGAAG 113320 Query 119939 ACAAGCAAAGTCGGTGTGTAGTCCTTCGTCTCTGGAAATGAGTTCGTTGCTGTAAGTCAA 119998 || |||||||||||||| || || || || | || ||||| |||||| | | || | Sbjct 113319 GCAGGCAAAGTCGGTGTGCAGGCCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTAAG 113260 Query 119999 GCCGGG 120004 |||||| Sbjct 113259 GCCGGG 113254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478660922129840