Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq48 419 6e-112 >seq48 Length=300044 Score = 419 bits (464), Expect = 6e-112 Identities = 1071/1624 (66%), Gaps = 22/1624 (1%) Strand=Plus/Minus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||| |||||| | || || | | ||| || || |||| | | ||| |||| || Sbjct 144018 TTCACCCACGCCTCACCCACTCTCTTCAACGCCGGCACTCCCCAGGCCCAGCTGTCATCG 143959 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| || | | ||||||||||| |||||| ||||||| ||||| || |||| Sbjct 143958 TGCTTCCTCGTCGACATGAAGGACGACAGCATCGATGGTATCTACGACACCCTCAAGACC 143899 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCA 363726 ||||| | |||||||||| || || || || || | |||||| ||||||| Sbjct 143898 TGTGCCATGATTTCCAAGATGGCCGGTGGTATCGGCCTCAACATCCACCGCATTCGTGCC 143839 Query 363727 CAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGT 363786 | | ||||| |||||| || ||| ||||| | || |||||||| ||| Sbjct 143838 ACGGGCTCCTACATCGCCGGCACCAACGGCACCTCCAATGGCATCGTGCCCATGCTGCGT 143779 Query 363787 GTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTT 363846 || ||| |||| || || | || |||||||||||||| |||||| || || ||| Sbjct 143778 GTTTTTAACAACACGGCACGCTATGTCGACCAGGGTGGCAACAAGCGCCCCGGCGCTTTT 143719 Query 363847 GCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAAC 363906 || || || || ||||| || ||||| | || ||||| || || || || || ||| Sbjct 143718 GCCATCTACCTGGAGCCATGGCACGCCGACGTGTTCGAGTTCCTCGACCTGCGCAAGAAC 143659 Query 363907 ACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCAT 363966 || || ||||| | || || || || || ||| || || ||| | | |||| Sbjct 143658 CACGGCAAGGAGGAGATCCGCGCCCGCGACCTCTTCCTGGCCCTGTGGATCCCGGACCTG 143599 Query 363967 TTTATGAAGCGCGTGGAGGCAGGTAAGA--ATTGGTCACTCTTTTGCCCACACGAATGTC 364024 || |||||||| || ||| | | | | | ||| | ||| | ||||| |||| || | Sbjct 143598 TTCATGAAGCGGGTTGAG--AAGAACGGCGACTGGACGCTCATGTGCCCCAACGAGTGCC 143541 Query 364025 CAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGG 364084 | || || | || | || || || | | ||||| ||||| ||||| || | Sbjct 143540 CCGGCCTGGCGGACTGCTACGGCGAGGAGTTCGAGGCTCTGTACGAGAAGTACGAGCGTG 143481 Query 364085 AGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGC 364144 |||| |||| || ||||| | || |||||||| |||| ||||||| | || | | Sbjct 143480 AGGGCAAGGGCCGCAAGACGCTCAAGGCGCAGAAGCTGTGGTATGCCATCCTCGAGGCCC 143421 Query 364145 AGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACC 364204 ||| ||||| || | |||| ||| ||||||| || |||||||||||| ||||| Sbjct 143420 AGACCGAGACTGGCAACCCCTTCATGCTGTACAAGGACCACTGCAACCGCAAGAGCAACC 143361 Query 364205 AGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACC 364263 || || |||| || || |||| |||| |||||| || |||||||| || || ||| | Sbjct 143360 AGAAGAACCTGGGCACCATTC-GCAGCTCCAACCTGTGCACCGAGATCATCGAGTACTCG 143302 Query 364264 GCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT---- 364319 || ||||||||| || || || ||||| |||||| | ||||| ||| |||| | Sbjct 143301 GCGCCCGACGAGGTGGCTGTGTGCAACCTGGCGTCGCTGGCGCTGCCGCAGTTTATCGAC 143242 Query 364320 --AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGC 364377 || || || | | ||| |||| | || | || || ||| | || | | Sbjct 143241 TACAACGAGGGAGCCTACGACTTCCAGAAGCTCCACGAGGTGACCCAGGTTGTCGTTCGT 143182 Query 364378 AATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG----AGCGTT 364432 || || ||||| | |||||| || || || || | | || || || ||| Sbjct 143181 AACCTTAACAAGATCATCGACGTCAACTACTACCCGGTCCAGGAGGCTCGCAACAGC--- 143125 Query 364433 CTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGA 364492 || ||||| || | || || || || || || ||||| || ||||| | || || Sbjct 143124 --AACATGCGCCACAGGCCCATCGGCCTGGGCGTGCAGGGTCTGGCTGATGCCTTCCTGG 143067 Query 364493 TGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAA 364552 ||| || | || || ||||| || ||||| | || || ||| |||||||||| | Sbjct 143066 CGCTGCGCCTGCCCTTCGAGTCGCCCGAGGCTCGCGAGCTCAACAAGCAGATCTTTGAGA 143007 Query 364553 CAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACT 364612 | || || ||||| |||| || ||||| || |||| |||| | |||| Sbjct 143006 CCATCTACCACGCCGCCCTGACCGCCTCGTGCGAGCTGGCGCGTGAGCAGGGCACCTACT 142947 Query 364613 CTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCA 364672 | || || ||||| || ||| | |||||||| | | |||| || | ||||| |||| Sbjct 142946 CGACGTACGAGGGCTCGCCTGTGTCGCAGGGCATTCTGCAGTACGACATGTGGAACGTCA 142887 Query 364673 CGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTC 364732 ||| || | | ||| ||||||| | || || || | ||| |||| ||| | Sbjct 142886 AGCCGTCGGAGCTCTGGGACTGGGAGGCTCTCAAGGCCGACATCAAGCAGCACGGTGTGC 142827 Query 364733 GCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACA 364792 ||||||| || || |||||||||||||| || || | |||||||| || |||| Sbjct 142826 GCAACTCGCTGCTTGTGGCGCCCATGCCCACAGCCAGCACGTCGCAGATCCTGGGCAACA 142767 Query 364793 ACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAAT 364852 ||||||||||||| || | ||| ||| | || ||||| || || |||| || | Sbjct 142766 ACGAGTGCTTCGAGCCCTACACATCCAACATCTACCAGCGCCGCGTGCTCGCCGGCGAGT 142707 Query 364853 TTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACA 364912 | | ||| || || || || ||||||| || ||| | || |||||| |||| Sbjct 142706 TCCAGGTCGTCAACCCGTGGCTGCTCAAGGACCTGGTCGAGCTTGGCCTGTGGTCCGACA 142647 Query 364913 GCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAG 364972 |||||||||| |||||||||| || || | |||||||| | | | || | Sbjct 142646 ACATGAAGAACCGCATCATCGCCGAGGGCGGCTCCATCCAGAACATCGCCAGCGTCCCCG 142587 Query 364973 AAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATA 365032 | || |||| | ||||| || || ||||| || || ||| || || | | | Sbjct 142586 AGGACACCAAGCGCCTGTACAAGACGGTCTGGGAGATCTCGCAGCGCACCGTCGTCCAGA 142527 Query 365033 TGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTC 365092 |||| ||||| ||||| || || ||| ||| |||||| | ||| | |||| Sbjct 142526 TGGCAGCCGACCGCGGCGCCTTCATCGACCAGTCGCAGTCGCTCAACATCCACATGCGCG 142467 Query 365093 AGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGA 365152 |||| ||| | |||| | || |||||||| ||| ||| ||||| ||| || |||| Sbjct 142466 AGCCCACCATGGGCAAGATCACGTCCATGCACTTCGCCGGCTGGAAGCTCGGCCTCAAGA 142407 Query 365153 CAGG 365156 | || Sbjct 142406 CGGG 142403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303349475293154