Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq50 118 2e-21 seq3 109 1e-18 seq185 100 6e-16 seq65 89.7 1e-12 seq5 87.8 4e-12 seq62 86.0 1e-11 seq24 86.0 1e-11 seq2 86.0 1e-11 seq1 86.0 1e-11 >seq50 Length=290317 Score = 118 bits (130), Expect = 2e-21 Identities = 316/481 (66%), Gaps = 13/481 (3%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| |||| ||||| ||||||||| ||||||||||| | Sbjct 113585 TCGAAGAAGTTGGTCTTGCCGCCCAGGGAGATGTTCTCCATGAAATCGAAGGGGTTGGAT 113526 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||| |||| | ||| || || || | || |||||||||||||||||| | Sbjct 113525 GCGCGGTAGACCTTGTCGTTGCCGAGAGCAACCAGGAGGCGGTCTGCCACAAACTCGATG 113466 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| ||| || | |||||||| || | || | ||| || | ||||| | | Sbjct 113465 TACTGCTTCATGAGGTTCGAGTTCATACCGAGCAGAGCACACGGCAGGGCCTCGGTCAGG 113406 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCTG--TGCCAGAG 251797 || || | ||| | || || || | | || ||| ||| || ||| | Sbjct 113405 AACTCTTGCTCGATCTTGACGGCATCGACGATGATCTCCTCGATCATTTGCTTGCTGG-- 113348 Query 251798 ACAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGT 251857 || |||||| || | ||| | || || | |||| | |||||| ||||| | Sbjct 113347 ---GCCTGTTCTTCATGTGGGAGAAGAGAAGGCAGGCAAAGTCGGTGTGCAGGCCCTCAT 113291 Query 251858 CGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCC 251917 | ||| ||||| ||||||||| | ||||| ||||||| || || ||| | |||| Sbjct 113290 CACGAGAGATGAGCTCGTTGGAGAAGGTAAGGCCGGGCATCAGGCCGCGCTTCTTCAGCC 113231 Query 251918 AGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAA 251977 ||||||| | | ||||| ||| ||| | | ||||||||| | | |||| | Sbjct 113230 AGAAGATAGAGGCAAAGGCTCCGCTGAAGAAGATACCCTCGACGGCGGCGAAGGCAATGA 113171 Query 251978 GGCGCTCAGCAAA---CGACTTGTCCTGCGACAAGAACTTCTGTGCCCATGCTGCCTTCT 252034 | ||| ||||| |||||| | | ||| | ||||| | ||||| | ||||||| Sbjct 113170 GTCGCGAGGCAAAGGTCGACTTCTTGTCCGAAATCCACTTCAGAGCCCAGTCGGCCTTCT 113111 Query 252035 T 252035 | Sbjct 113110 T 113110 >seq3 Length=2538176 Score = 109 bits (120), Expect = 1e-18 Identities = 200/293 (68%), Gaps = 0/293 (0%) Strand=Plus/Minus Query 218518 GACTTCATCGACAAGGAGCTCATTCTTTTCTCGCGGTATGATGTGGAGCGTTCTATTCCC 218577 |||||| || ||||||||||||| || ||| | ||| |||||| || || Sbjct 2102419 GACTTCGTCAACAAGGAGCTCATCCTCTTCAGCATGGCTGACAACATGCGTTCGATCCCT 2102360 Query 218578 AGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAAGCGG 218637 ||||| || ||||| ||||| ||||| ||| || |||| || ||||| ||| Sbjct 2102359 TCGGTGGTCGACGGCCTGAAGCCTGGACAGCGCAAGGTCATCTTCGCGAGTTTCAAACGG 2102300 Query 218638 AACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGC 218697 |||||||| |||| | ||||||| |||| ||||||| || || ||| | | | Sbjct 2102299 AACCTGGTAAAAGACAAGAAGGTCGTCGAGTTGGCTGGTTACGTCTCGGAACAGGCCGCC 2102240 Query 218698 TACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGTG 218757 ||||| ||||||||| || ||| ||||| | ||| |||| ||| ||| ||| Sbjct 2102239 TACCACCACGGTGAGGTCTCGCTACAGCAGACCATTATCGGCCTGGCTCAGAACTTTGTC 2102180 Query 218758 GGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCT 218810 || |||||| |||||| || |||| ||| | || ||||||||||| Sbjct 2102179 GGGTCCAACAACGTGAACTGCCTCGAGCCCAGTGGTAACTTCGGTTCTCGTCT 2102127 >seq185 Length=1179 Score = 100 bits (110), Expect = 6e-16 Identities = 171/243 (70%), Gaps = 4/243 (2%) Strand=Plus/Minus Query 279316 AGGACGAAGCAGAGAAGGA-GACTGAGCCAGGTGAGGATCTGTGTGACTGTGATTTCTCG 279374 |||| || | ||| |||| ||| ||| |||||||| ||||| |||| ||||| Sbjct 737 AGGAGGAGGGTGAGGAGGACGAC-GAGGAGGGTGAGGACCTGTGCAACTGCACCTTCTCC 679 Query 279375 CTCGCATATGGTGGGAAGATTCTGCTAAACTCTACCCGCCTCAACATCAAGCGTGGCAAC 279434 ||||| || |||| ||||| ||||| ||| || | |||| | | ||||||||| | Sbjct 678 CTCGCCTACGGTGCCAAGATCCTGCTGAACCAGACGCACCTCCGCCTGAAGCGTGGCCAG 619 Query 279435 CGGTATGGTCTCATCGGTCCCAATGGAGCGGGTAAGAGCACTCTAATGCGCGCCATTGCA 279494 || || ||||| ||||||||| || |||| ||| || || ||||||||||| Sbjct 618 CGCTACGGTCTGTGCGGTCCCAACGGTTCGGGCAAGTCGACCCTCATGCGCGCCATCAAC 559 Query 279495 AACGGTCAGCTGGAAGGATTTCCTAACGCA-TCTGAGGTAAGGACAGTGTATGTAGAGCA 279553 |||| ||| | | ||| ||||| | ||| ||||| | ||| |||| || ||||| Sbjct 558 AACGAGCAGGTCG-AGGGTTTCCCCAAGCAGAGCGAGGTCAAGACCGTGTTCGTTGAGCA 500 Query 279554 CGA 279556 ||| Sbjct 499 CGA 497 >seq65 Length=238739 Score = 89.7 bits (98), Expect = 1e-12 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 279696 GTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTG 279755 || || || || ||||| ||||||||||||||||| || || ||||||| || || | Sbjct 90484 GTCGGATCGCTCTCGGGAGGTTGGAAGATGAAGCTCGCTCTGGCTCGCGCTATGCTCCAA 90543 Query 279756 CGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCC 279815 | ||||||||||| ||||| || ||||| || |||||| |||| |||| | || Sbjct 90544 AGGGCCGATGTCCTGCTGCTGGACGAGCCTACTAACCACCTGGATGTTGCCAATATCGCA 90603 Query 279816 TGGCTAGTGTCCTACCT 279832 ||||| | | |||||| Sbjct 90604 TGGCTCGAGAACTACCT 90620 Score = 86.0 bits (94), Expect = 1e-11 Identities = 132/186 (71%), Gaps = 8/186 (4%) Strand=Plus/Plus Query 280176 ATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGA---GACC 280232 ||||||||||| |||||||| ||||| || || ||||| | || || ||||| || | Sbjct 90967 ATTGGACCCAACGGTGCGGGCAAGTCCACGCTCATCAAGCTGCTTACCGGCGAAGTGATC 91026 Query 280233 CAGGCCACT-GAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCA 280291 | | | || || |||| |||||| || ||| |||| || | ||| || || Sbjct 91027 CCGTCATCTGGAAAGGTC----GAGAAGCACCCGAACCTGCGTATCGGCTACATCAAACA 91082 Query 280292 GCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTG 280351 |||||| | | ||| |||||| |||||||| | ||| || ||||| ||| | ||||| Sbjct 91083 GCACGCGCTGGAGCACGTCGAGATGCACCTGGAGAAGACCCCCAACCAGTACTTGCAGTG 91142 Query 280352 GCGCTA 280357 ||| || Sbjct 91143 GCGTTA 91148 >seq5 Length=1921117 Score = 87.8 bits (96), Expect = 4e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 142498 GAGATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGT 142557 ||| | |||||||||||||| ||||||||||| ||||||||||||| ||| | |||| Sbjct 1728465 GAGTTCGCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGT 1728406 Query 142558 TCGAGCCCCACATCGGGC 142575 |||| |||| |||||||| Sbjct 1728405 TCGACCCCCGCATCGGGC 1728388 >seq62 Length=248580 Score = 86.0 bits (94), Expect = 1e-11 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 || |||||||||||||| ||||||||||| ||||||||||||| ||| | ||||||| Sbjct 179129 ATCGCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCG 179070 Query 142561 AGCCCCACATCGGGC 142575 | |||| |||||||| Sbjct 179069 ACCCCCGCATCGGGC 179055 >seq24 Length=528776 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| | Sbjct 118185 GCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGACC 118244 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 118245 CCCGCATCGGGC 118256 >seq2 Length=2981670 Score = 86.0 bits (94), Expect = 1e-11 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 || |||||||||||||| ||||||||||| ||||||||||||| ||| | ||||||| Sbjct 1044406 ATCGCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCG 1044465 Query 142561 AGCCCCACATCGGGC 142575 | |||| |||||||| Sbjct 1044466 ACCCCCGCATCGGGC 1044480 >seq1 Length=4491949 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| | Sbjct 3448625 GCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGACC 3448684 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 3448685 CCCGCATCGGGC 3448696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027833547217727