Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq1 91.5 1e-13 >seq1 Length=4491949 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| || || || || ||| || || || || || Sbjct 3513820 GTCGACTCCTTCTGGATGTTGTAGTCTGACAAGGTGCGGCCATCCTCCAGCTGCTTGCCC 3513761 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| || ||||| ||||||||||||||||| |||||||| ||||| || Sbjct 3513760 GCGAAGATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCTTTGTCCTGGATCTTGCTCTTC 3513701 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| || |||| |||||||| || | || | ||||| || |||| || Sbjct 3513700 ACGTTATCAATCGTATCGGATGATTCGACTTCGAGCGTGATGGTTTTTCCAGTCAAGGTC 3513641 Query 114366 TTTACAAAAATCTGCATG 114383 || || || ||||||||| Sbjct 3513640 TTCACGAAGATCTGCATG 3513623 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || || || ||||||||||| || || ||| ||| || || || || || || || Sbjct 3513586 TCCTTCTGGATGTTGTAATCCGACAGGGTGCGACCATCCTCCAGCTGCTTGCCCGCAAAG 3513527 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 || | ||| || |||||||| || ||||| || ||||| |||||| || | | Sbjct 3513526 ATCAAACGTTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTGCTCTTGACGTTG 3513467 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 |||| ||||| | || ||||| |||| || | || |||||||| ||||| || || Sbjct 3513466 TCAATCGTGTCTGATGACTCGACTTCCAGCGTGATGGTCTTGCCGGTAAGAGTCTTGACG 3513407 Query 114372 AAAATCTGCATG 114383 || ||||||||| Sbjct 3513406 AAGATCTGCATG 3513395 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || || ||||||||||| ||| | ||| ||| ||| || ||||| || ||||| || Sbjct 3513358 TCCTTCTGAATGTTGTAGTCGGAAAGAGTCCGACCATCCTCGAGTTGCTTTCCAGCAAAG 3513299 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 || || ||||| ||||| || || || || || ||||| |||||| || | | Sbjct 3513298 ATCAGGCGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGAATCTTCGACTTGACATTG 3513239 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 || | |||||| | || || || |||| ||| | || ||||| ||||| || || || Sbjct 3513238 TCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATAGTCTTGCCCGTCAGGGTCTTGACG 3513179 Query 114372 AAAATCTGCAT 114382 || || ||||| Sbjct 3513178 AAGATTTGCAT 3513168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420133135264164