Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq48 744 0.0 seq50 244 2e-59 >seq48 Length=300044 Score = 744 bits (824), Expect = 0.0 Identities = 1466/2136 (69%), Gaps = 83/2136 (4%) Strand=Plus/Plus Query 243737 ACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTG 243796 ||| ||||||||| || | |||| |||| ||| | |||||||||||||| |||||| Sbjct 142352 ACGGTGAACTGGATAGGCTGGGCGGCAGCCTGGGTGCGGAGGTAGTACATGCCCGTCTTG 142411 Query 243797 AGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGG 243856 || || |||| || || |||||||| ||| | ||| ||| || ||| Sbjct 142412 AGGCCGAGCTTCCAGCCGGCGAAGTGCATGGACGTGATCTTGCCCATGGTGGGCT----- 142466 Query 243857 TCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCC-CGCTC 243915 ||| || || |||||| ||||| |||||||| ||||| |||| || || Sbjct 142467 -------CGCGCATGTGGATGTTGAGCGACTGCGACTGGTCGATGAAGG-CGCCGCGGTC 142518 Query 243916 TGCGGCCATGGTGATGA-GGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCT 243974 || ||||| || || ||| | ||| || ||||| | |||||||||| | | ||| Sbjct 142519 GGCTGCCATCTGGACGACGGTGCG-CTGCGAGATCTCCCAGACCGTCTTGTACAGGCGCT 142577 Query 243975 TGAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGG 244034 || || |||||||| | |||||||||| | ||||| | | |||||| || Sbjct 142578 TGGTGTCCTCGGGGACGCTGGCGATGTTCTGGATGGAGCCGCCCTCGGCGATGATGCGGT 142637 Query 244035 TGCGCATGTTATCGTTCCACAGGCCCAAGCGCT-CCAGCGCCTCGACCAGGTGCCTGTTC 244093 | |||||| ||| ||||||||| |||| | |||| ||| || ||| | ||| Sbjct 142638 TCTTCATGTTGTCGGACCACAGGCC-AAGCTCGACCAGGTCCTTGAGCAGCCACGGGTTG 142696 Query 244094 ACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCG 244153 || ||||| ||||| || | ||||||||||||||||||| |||| || |||||| Sbjct 142697 ACGACCTGGAACTCGCCGGCGAGCACGCGGCGCTGGTAGATGTTGGATGTGTAGGGCTCG 142756 Query 244154 ATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGC 244213 | || ||| |||||||||| ||||||| |||||| || || |||||||||| ||| ||| Sbjct 142757 AAGCACTCGTTGTTGCCCAGGATCTGCGACGTGCTGGCTGTGGGCATGGGCGCCACAAGC 142816 Query 244214 AGACTGTTCCTCACGCCGTGCCTCTGGATG-CGGAGTCTGAGCTCGTTCCAGTCCCACAT 244272 || ||| | ||| |||||| || |||| ||| | |||| | | ||||||||| | Sbjct 142817 AGCGAGTTGCGCACACCGTGCTGCTTGATGTCGGCCT-TGAGAGCCTCCCAGTCCCAGAG 142875 Query 244273 GCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGAC 244332 |||| || | |||| | ||||||||| ||||||| | |||| || Sbjct 142876 CTCCGA--------CG-GCTTGACGTTCCACATGTCGTACTGCAGAATGCCCTGCGACAC 142926 Query 244333 GGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGG-GCCAGCTTACAGCTCTCGT 244391 || ||||||||| |||| ||||| || | || | | ||||||| || || Sbjct 142927 AGGCGAGCCCTCGTACGTCGAGTAGGTGCCCT-GCTCACGCGCCAGCTCGCACGAGGCGG 142985 Query 244392 CGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGC 244451 |||||||||| |||||||||||| |||||| |||||| | ||||| |||| | Sbjct 142986 TCAGGGCGGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAGCTCGCGAGCCTCGGGCG 143045 Query 244452 AGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGA 244511 | |||||| | || || | || |||| | || ||||| ||||||||||| | ||||| Sbjct 143046 ACTCGAAGGGCAGGCGCAGCGCCAGGAAGGCATCAGCCAGACCCTGCACGCCCAGGCCGA 143105 Query 244512 TGGGTCTGTGTCGCTTGTTGGAGC-GCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCG 244570 |||| ||||| ||| ||||| | || | || | || || ||||| ||||| ||||| Sbjct 143106 TGGGCCTGTGGCGCATGTTGCTGTTGCGAGCCTCCTGG-ACCGGGTAGTAGTTGACGTCG 143164 Query 244571 ATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCG 244630 || | |||||| ||||| || || | || || ||| ||| ||| |||||| Sbjct 143165 ATGATCTTGTTAAGGTTACGAACGACAACCTGGGTCACCTCGTGGAGCTTCTGGAAGTCG 143224 Query 244631 TACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCC 244690 || || ||||| | | ||| ||||| || || | ||| Sbjct 143225 TA------GGCTCCCTCGTTGTAGTCGAT------AAACTGCGGCAGCGCCAGCGACGCC 143272 Query 244691 AGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTA 244750 |||||||| || |||||||| || | | ||||| || ||||||||||| ||||| Sbjct 143273 AGGTTGCACACAGCCACCTCGTCGGGCGCCGAGTACTCGATGATCTCGGTGCACAGGTTG 143332 Query 244751 CTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAG 244810 || ||||||||||||| || || ||| |||| ||||||| ||||||||| Sbjct 143333 GAGCTGCGAATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAC 143392 Query 244811 AGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTA 244870 ||||||||||| || |||||| |||||| |||||| | | ||| || | | Sbjct 143393 AGCATGAAGGGGTTGCCAGTCTCGGTCTGGGCCTCGAGGATGGCATACCACAGCTTCTGC 143452 Query 244871 GCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAAC 244930 ||||||| |||| |||| |||||||||| |||||| |||||| ||||||||| Sbjct 143453 GCCTTGAGCGTCTTGCGGCCCTTGCCCTCACGCTCGTACTTCTCGTACAGAGCCTCGAAC 143512 Query 244931 TCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCG 244990 || ||| || || | |||||||||||| ||||||||||| |||| ||| Sbjct 143513 TCCTCGCCGTAGCAGTCCGCCAGGCCGGGGCACTCGTTGGGGCACATGAGCGTCCAGTCG 143572 Query 244991 CCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCC 245050 ||| | || |||| || |||||| ||||| |||||||| |||||| |||||||||| Sbjct 143573 CCGTTCTTCTCAACCCGCTTCATGAACAGGTCCGGGATCCACAGGGCCAGGAAGAGGTCG 143632 Query 245051 CTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCG 245110 | || | ||| ||| ||| |||||| | ||| || | || || || |||||| Sbjct 143633 CGGGCGCGGATCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCGAGGAACTCGAACACGTCG 143692 Query 245111 ACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCC 245170 ||||||| ||||||| ||||| || | |||||||| ||||||||||| |||||||| Sbjct 143693 GCGTGCCATGGCTCCAGGTAGATGGCAAAAGCGCCGGGGCGCTTGTTGCCACCCTGGTCG 143752 Query 245171 AC-CATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCC 245229 || | | | || | ||| || | ||||| | ||||| ||||| || ||| ||| Sbjct 143753 ACATAGCGTGCCGTG-TTGTTAAAAACACGCAGCATGGGCACGATGCCATTGGAGGTGCC 143811 Query 245230 GTTGGTGCCCTTGATGTAGGCGCCCTTGCCCC---TGAGGTTGCTGATGGACATGCCTAG 245286 ||||||||| |||||||| |||| || | | || ||| | || || | ||| | Sbjct 143812 GTTGGTGCCGGCGATGTAGGAGCCCGTGGCACGAATGCGGTGGATGTTG---AGGCCGAT 143868 Query 245287 TCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCAT 245346 || ||||| |||||| || | ||| ||| |||||| |||||| || || || || Sbjct 143869 ACCACCGGCCATCTTGGAAATCATGGCACAGGTCTTGAGGGTGTCGTAGATACCATCGAT 143928 Query 245347 GCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGA 245406 |||||| |||||||| || || ||||| || |||||||||| || ||| ||| | Sbjct 143929 GCTGTCGTCCTTCATGTCGACGAGGAAGCACGATGACAGCTGGGCCTGGGGAGTGCCGGC 143988 Query 245407 GTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTG 245466 |||||| |||||||| ||||||||| ||||| |||||| | || |||||||| Sbjct 143989 GTTGAAGAGAGTGGGTGAGGCGTGGGTGAAGTACTTGCTCGACATGAGGTTGTACGTCTC 144048 Query 245467 GAGCA-GAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGCT 245525 ||||| | || || ||||||||||| ||| | ||| | ||||| |||||| Sbjct 144049 GAGCACGCGC-TCAATGTTGTCGCCCCAGATGCCGACAGCGACACGCATGATCATGTGCT 144107 Query 245526 -GGGGCG-TC-TCGATGGGTCCCTCGGGTCCCTTGAGCATGTAGGAGCGCTCGAGCGTCT 245582 |||||| || |||| || ||| | |||||||| ||| |||||||| || |||| Sbjct 144108 GGGGGCGCTCGACGATCTTGCCGTCGAG---CTTGAGCAGGTACGAGCGCTCCAGGGTCT 144164 Query 245583 TGAACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCTGACGGCTGCGTCGAGTCTCT 245642 |||| ||||||||| |||| ||||| || | || ||| | ||||| || Sbjct 144165 TGAAGCCAAAGTACTGGTAGTTGAAGTCCCGGTCATAGACGATGGCCGAGTCGA-ACT-- 144221 Query 245643 CGGCGTGCTTCTGAC---TGAC---CTCGTAAAACTTTTGCGCTATGAGGGGAG---CCC 245693 ||| ||| || | |||| ||||| || || || || | ||| | || Sbjct 144222 ---CGTCCTTGTGGCGCATGACGCAGTCGTACGTCTCCTGGGCGATCATGGGCGACAGCC 144278 Query 245694 TGAGCCCGGTGTCCGGATTGACGT--TGAACCAGAGCCTCTTGCACACCTCCGAGAACTT 245751 || ||| | | || ||||||| || | ||| | | || || ||| |||||||| Sbjct 144279 TG---CCGTTCTTGGGGTTGACGTAGTGGAACAG-GTCGCTGACA-ACCGACGAGAACTG 144333 Query 245752 GGGGCTGGTGAGCTTATGCAGGTTGGTGACTGCTATGCGCGCCGCCAACTTGCTGTAGTC 245811 |||| |||| |||||||||| || || |||||||| |||| || |||||| Sbjct 144334 CTTCTTGGTCTGCTTGTGCAGGTTGGACACGGCGATGCGCGCAGCCAGGATGGCGTAGTC 144393 Query 245812 GGGGTGAGTGGTGGTCATGTTGGAGGCCGTGTGGGC 245847 |||||| ||| |||||||| | |||||| | ||| Sbjct 144394 GGGGTGTGTGACGGTCATGTATGCGGCCGTCTCGGC 144429 >seq50 Length=290317 Score = 244 bits (270), Expect = 2e-59 Identities = 371/521 (71%), Gaps = 19/521 (4%) Strand=Plus/Plus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACG-CAAC 42691 || |||||| |||||||| |||||||| || || ||||| | | | || | | || Sbjct 113098 CCATGCATCCGTAAGAAGGCCGACTGGGCTCTGAAGTGGATTTCG-GACAAGAAGTCGAC 113156 Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751 || | | | | || | ||||| ||||||||||||| ||||||||| || ||||| Sbjct 113157 CTTTGCCTCGCGACTCATTGCCTTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGAGCCTT 113216 Query 42752 CGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGA 42811 ||||| ||||||||||| ||| || | ||||||||| || |||||||| ||||| Sbjct 113217 TGCCTCTATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCCGGCCTTACCTTCTCCAACGA 113276 Query 42812 ACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCA 42871 |||||| | || ||||| ||||| | |||||||||||||| || ||||| ||| Sbjct 113277 GCTCATCTCTCGTGATGAGGGCCTGCACACCGACTTTGCCTGCCTTCTCTTCTC---CCA 113333 Query 42872 CCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGAT 42931 | | | | ||| |||| ||| | | || || |||||| || ||||| |||| Sbjct 113334 CATGAAGAACAGGCCCAGCAAGCAAATGATCGAGGAGATCATCGTCGATGCCGTCAAGAT 113393 Query 42932 CGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGT-CCCTGGTCGGCATGAACCACGACC 42990 |||| | |||||||| || || | ||| |||||| | ||| |||| |||||| ||| Sbjct 113394 CGAGCAAGAGTTCCTGACCGAGGCCCTG-CCGTGTGCTCTGCTCGGTATGAACTCGAACC 113452 Query 42991 TCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGC- 43049 ||||| |||||||| ||| || || |||| ||||| | | | |||| || Sbjct 113453 TCATGAAGCAGTACATCGAGTTTGTGGCAGACCGCCTCCT------GGTTGCTCTCGGCA 113506 Query 43050 -CGCC----TCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGG 43104 || | ||||| | | | ||||||||| || |||||||||||||| ||| | Sbjct 113507 ACGACAAGGTCTACCGCGCATCCAACCCCTTCGATTTCATGGAGAACATCTCCCTGGGCG 113566 Query 43105 GCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 ||||||||||||| |||||||||||||| | ||| |||||| Sbjct 113567 GCAAGACCAACTTCTTCGAGAAGCGCGTGGGCGAGTACCAG 113607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944336284352720