Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq185 89.7 1e-12 >seq185 Length=1179 Score = 89.7 bits (98), Expect = 1e-12 Identities = 172/251 (69%), Gaps = 2/251 (1%) Strand=Plus/Plus Query 334105 AGTCAATGATAGCCATGTTAGAATCGGACCCGTCGAGATCGTGTTCCACGTAAGCAGTTT 334164 |||||||| | | ||| | || |||| | || |||||||| || ||| | | || | Sbjct 459 AGTCAATGGTGGTCATCTCAGTGTCGGCGGCATCAAGATCGTGCTCAACGAACACGGTCT 518 Query 334165 TCAAAACA-TCCGCAGAGGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGA 334223 | | | || || ||| |||||| | | ||| |||| || |||||||| || Sbjct 519 TGACCTCGCTCTGCTTGGGGAAACCCT-CGACCTGCTCGTTGTTGATGGCGCGCATGAGG 577 Query 334224 GTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTG 334283 || || || |||| ||||| || || |||||||||||||| | ||||||||||| | Sbjct 578 GTCGACTTGCCCGAACCGTTGGGACCGCACAGACCGTAGCGCTGGCCACGCTTCAGGCGG 637 Query 334284 AACCGCGTATTGTTCAGAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACAC 334343 | |||| | |||||| || || || |||| || || || || || || | ||| Sbjct 638 AGGTGCGTCTGGTTCAGCAGGATCTTGGCACCGTAGGCGAGGGAGAAGGTGCAGTTGCAC 697 Query 334344 AGATCCTCACC 334354 || |||||||| Sbjct 698 AGGTCCTCACC 708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102876509729450