Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq48 459 3e-124 >seq48 Length=300044 Score = 459 bits (508), Expect = 3e-124 Identities = 1155/1730 (67%), Gaps = 64/1730 (4%) Strand=Plus/Minus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||||| |||||| || |||||| |||||||| |||||| | || ||| Sbjct 144186 AACTACCAGTACTTTGGCTTCAAGACCCTGGAGCGCTCGTACCTGCTCAAGCTCGACGGC 144127 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | | | |||||| || || || || | ||||| ||||| |||| || ||| || Sbjct 144126 AAGATCGTCGAGCGCCCCCAGCACATGATCATGCGTGTCGCTGTCGGCATCTGGGGCGAC 144067 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894 |||| | || | | | | || |||| | |||| | ||| ||| Sbjct 144066 AACATTGAGCGCGTGCTCGAGACGTACAACCTCATGTCGAGCAAGTACTTCACCCACGCC 144007 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953 | || || || |||||||| || || || | | ||| |||| ||||| ||||| | Sbjct 144006 TCACCCACTCTCTTCAACGCCGGCACTCCCCAGGCCCAGCTGTCATCGTGCTTCCTCGTC 143947 Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013 ||| | |||| |||| |||| || || | ||||| ||||||| |||||| | || Sbjct 143946 GAC-ATGAAGGACGACAGCATCGATGGTATCTACGACACCCTCAAGACCTGTGCCATGAT 143888 Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073 || || || || || ||||| ||| ||||| | | ||||||| ||| ||||| Sbjct 143887 TTCCAAGATGGCCGGTGGTATCGGCCTCAACATCCACCGCATTCGTGCCACGGGCTCCTA 143828 Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133 |||| ||| ||||| ||||||||||| ||| |||| || ||||| || || || ||||| Sbjct 143827 CATCGCCGGCACCAACGGCACCTCCAATGGCATCGTGCCCATGCTGCGTGTTTTTAACAA 143768 Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193 | |||| ||||| || ||||||||||| | | | || |||| || |||| || Sbjct 143767 CACGGCACGCTATGTCGACCAGGGTGGCAACAAGCGCCCCGGCGCTTTTGCCATCTACCT 143708 Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253 ||||| |||||||| |||||| | ||| |||||||||| |||||||||||||| || Sbjct 143707 GGAGCCATGGCACGCCGACGTGTTCGAGTTCCTCGACCTGCGCAAGAACCACGGCAAGGA 143648 Query 94254 TCTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310 ||||| | ||| | ||||||||| || || ||| | || ||||| || ||||| Sbjct 143647 ---GGAGATCCGCGCCCGCGACCTCTTCCTGGCCCTGTGGATCCCGGACCTGTTCATGAA 143591 Query 94311 ACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTC 94370 || || ||||| ||| || ||||| || | || ||||| || || ||||| ||| | Sbjct 143590 GCGGGTTGAGAAGAACGGCGACTGGACGCTCATGTGCCCCAACGAGTGCCCCGGCCTGGC 143531 Query 94371 CGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGC 94430 ||| | || | || || | |||| | ||||| ||||||||| Sbjct 143530 GGACTGCTACGGCGAGGAGTTCGAGGCTCTGTACGAGAAGTACGAGCGTGAGGGCAAGGG 143471 Query 94431 CAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGAC 94490 | | ||| | | || |||||||||| || ||| | || | ||| ||||| Sbjct 143470 CCGCAAGACGCTCAAGGCGCAGAAGCTGTGGTATGCCATCCTCGAGGCCCAGACCGAGAC 143411 Query 94491 GGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACC 94549 || | |||| ||| ||| |||||| | ||| |||| |||| ||||||| || ||| Sbjct 143410 TGGCAACCCCTTCATGCTGTACAAGGACCACTG-CAACCGCAAGAGCAACCAGAAGAACC 143352 Query 94550 TCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACG 94609 | || || ||||| || |||||||||||||| ||||||| | | || |||| Sbjct 143351 TGGGCACCATTCGCAGCTCCAACCTGTGCACCGAGATCATCGAGTACTCGGCGCCCGACG 143292 Query 94610 AGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTC-CACTTTCGTGCGAGATGCCTAC 94668 || | |||||||| ||||||| || | ||| | || ||| ||| |||| Sbjct 143291 AGGTGGCTGTGTGCAACCTGGCGTCGCTGGCGCTGCCGCAGTTT--ATCGA-----CTAC 143239 Query 94669 ACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGG-GA---AGGATG-- 94722 | | | | | | ||| | || |||| | || || || ||| || Sbjct 143238 A--ACGA-GGGAGCCTACGACTTCCAGAAGCT------CCACGAGGTGACCCAGGTTGTC 143188 Query 94723 GTCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAAC 94782 || ||||| |||| | | |||||| |||| |||||| |||| |||||| ||| Sbjct 143187 GTTCGTAACCTTAACAAGATCATCGACGTCAACTACTACCCGGTCCAGGAGGCTCGCAAC 143128 Query 94783 TCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTG 94842 ||| || || ||||||||||| | ||||| |||||| | || || || | || Sbjct 143127 AGCAACATGCGCCACAGGCCCATCGGCCTGGGCGTGCAGGGTCTGGCTGATGCCTTCCTG 143068 Query 94843 ATGATGCGTCTGCCCTACGACTCTGTCGACGC-GGCGGGTTTGAATTTGAACATATTCGA 94901 | |||| ||||||| ||| || ||| || ||| | | || | | || || || Sbjct 143067 GCGCTGCGCCTGCCCTTCGAGTCGCCCGAGGCTCGCGAG-CTCAACAAGCAGATCTTTGA 143009 Query 94902 AAGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACG---GCGG 94958 | ||| || ||| ||| ||| ||| || | | || || | | || || | Sbjct 143008 GACCATCTACCACGCCGCCCTGA------CCG-CCTCGT-GCGAGCTGGCGCGTGAGCAG 142957 Query 94959 GCCAC--ACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTC 95016 | ||| || ||| | || ||||| || ||||||||| | |||| |||| | Sbjct 142956 GGCACCTACTCGACGTACGAGGGCTCGCCTGTGTCGCAGGGCATTCTGCAGTACGACATG 142897 Query 95017 TGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAA 95076 ||| || ||||| |||| || | |||||||| ||||| || || | | | Sbjct 142896 TGGAACGTCAAGCCGTCGGAGCTCTGGGACTGGGAGGCTCTCAAGGCCGACATCAAGCAG 142837 Query 95077 CACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATC 95136 ||||||||| ||| ||||||||||||| ||||||||||| ||| |||| |||||||| Sbjct 142836 CACGGTGTGCGCAACTCGCTGCTTGTGGCGCCCATGCCCACAGCCAGCACGTCGCAGATC 142777 Query 95137 CTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTC 95196 || ||||||||||||| ||||| |||| ||| |||||| | ||| | | || |||||| Sbjct 142776 CTGGGCAACAACGAGTGCTTCGAGCCCTACACATCCAACATCTACCAGCGCCGCGTGCTC 142717 Query 95197 GCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTC--TCTGGGTG 95254 ||||| || |||| ||| ||||| | || || ||||||| ||| || || Sbjct 142716 GCCGGCGAGTTCCAGGTCGTCAACCCGTGGCTGCTCAAGGACCTG--GTCGAGCTTGGCC 142659 Query 95255 TGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAA---CGGCTCCGTCCAGAACA 95311 ||||| ||||| | ||||||| | | |||| | ||||||| ||||||||| Sbjct 142658 TGTGGTCCGACAACATGAAGAACCGCATCAT---CGCCGAGGGCGGCTCCATCCAGAACA 142602 Query 95312 TCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGC 95371 || | | || ||||||| |||| || |||||||| || ||||||||| |||||| Sbjct 142601 TCGCCAGCGTCCCCGAGGACACCAAGCGCCTGTACAAGACGGTCTGGGAGATCTCGCAGC 142542 Query 95372 GCGTGATACTCGACCA---CGCGGCCGCCCGCGGGCCCTTCATCTGCCAG 95418 || | ||| ||| || |||| |||||| |||||||| |||| Sbjct 142541 GC---ACCGTCGTCCAGATGGCAGCCGACCGCGGCGCCTTCATCGACCAG 142495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494721672542120