Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq48 215 6e-51 >seq48 Length=300044 Score = 215 bits (238), Expect = 6e-51 Identities = 1050/1648 (64%), Gaps = 37/1648 (2%) Strand=Plus/Plus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 |||||||||||||| ||||||||||| || |||||||| | | ||||| || | Sbjct 142388 CGGAGGTAGTACATGCCCGTCTTGAGGCCGAGCTTCCAGCCGGCGAAGTGCATGGACGTG 142447 Query 115618 AACTTGGAGAGTGTTGGACTTTC-CATGAAGAGGTTCATACTTTGGGATTGATCGATGAA 115676 | |||| | || ||| || | |||| || ||| | || || || |||||||| Sbjct 142448 ATCTTGCCCA-TGGTGGGCTCGCGCATGTGGATGTTGAGCGACTGCGACTGGTCGATGAA 142506 Query 115677 GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCT 115736 | || || || || ||||| | | || | | ||| ||||| || || | Sbjct 142507 GGCGCCGCGGTCGGCTGCCATCTGGACGACGGTGCGCTGCGAGATCTCCCAGACCGTCTT 142566 Query 115737 GTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTT 115796 ||| ||| ||| | || || |||| |||| || ||||| ||||| || | Sbjct 142567 GTACAGGCGCTTGGTGTCCTCGGGGACGCTGGCGATGTTCTGGATGGAGCCGCCCTCGGC 142626 Query 115797 GACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAG 115856 || ||| | | |||||| | | ||||| || |||| || || |||| | || Sbjct 142627 GATGATGCGGTTCTTCATGTTGTCGGACCACAGGCCAAGCTCGACCAGGTCCTTGAGCAG 142686 Query 115857 GTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGT 115916 | ||||| || ||||| || ||||| ||| | | | |||||||||| || Sbjct 142687 CCACGGGTTGACGACCTGGAACTCGCCGGCGAGCACGCGGCGCTGGTAGATGTTGGATGT 142746 Query 115917 GTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGG 115976 ||| ||||| |||||||| ||||| |||| ||| || | ||| ||||||||||||||| Sbjct 142747 GTAGGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGCGACGTGCTGGCTGTGGGCATGGG 142806 Query 115977 TGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCA 116036 |||| || || |||||| | ||| | | | ||| ||||||| || ||||| Sbjct 142807 CGCCACAAGCAGCGAGTTGCGCACACCGTGCTGCTTGATGTCGGCCTTGAGAGCCTCCCA 142866 Query 116037 GTCGTAGTTGAGCT---TTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGA 116093 ||| | ||||| | || | | |||||| || |||| || || || || || Sbjct 142867 GTCCCA---GAGCTCCGACGGCTTGACGTTCCACATGTCGTACTGCAGAATGCCCTGCGA 142923 Query 116094 CGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGC 116153 | | ||||| ||||| | ||| || | ||||| | ||||| ||| | || Sbjct 142924 CACAGGCGAGCCCTCGTACGTCGAGTAGGTGCCCTGCTCACGCGCCAGCTCGCACGAGGC 142983 Query 116154 CTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTC 116213 ||||| ||||| || || |||||||| || | || | | |||||| Sbjct 142984 GGTCAGGGCGGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAGCTCGCGAGCCTCGGG 143043 Query 116214 GGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCC 116273 || || || | || || | | || |||| || ||||| || || || ||||| Sbjct 143044 CGACTCGAAGGGCAGGCGCAGCGCCAGGAAGGCATCAGCCAGACCCTGCACGCCCAGGCC 143103 Query 116274 AATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATC 116333 || || | || | ||| || || ||||| || || || || | || || Sbjct 143104 GATGGGCCTGTGGCGCATGTTGCTGTTGCGAGCCTCCTGGACCGGGTAGTAGTTGACGTC 143163 Query 116334 GATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATC 116393 ||| | | | || || || |||||||| || | || || ||||| | | | || Sbjct 143164 GATGATCTTGTTAAGGTTACGAACGACAACCTGGGTCACCTCGTGGAGCTTCTGGAAGTC 143223 Query 116394 -AAAACTGCGAGTC-TCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACAC 116451 | || | || | | | || | ||| || || || | |||||||| || ||| Sbjct 143224 GTAGGCTCC--CTCGTTGTAGTCGATAAACTGCGGCAGCGCCAGCGACGCCAGGTTGCAC 143281 Query 116452 ACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTA 116511 |||| ||| || | | |||||| || || || || |||| || || || | Sbjct 143282 ACAGCCACCTCGTCGGGCGCCGAGTACTCGATGATCTCGGTGCACAGGTTGGAGCTGCGA 143341 Query 116512 ATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATAT 116571 |||||||||| |||||| || || ||| ||| || |||||||| ||||| | Sbjct 143342 ATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGCATGAAG 143401 Query 116572 GGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCAC 116630 || | || ||||| || |||| || ||| || || | ||| | | || ||| || | Sbjct 143402 GGGTTGCCAGTCTCGGTCTGGGCCTCGAGGATGGCATACCACAGCTTCTGCGCCTTG--- 143458 Query 116631 AGTGGCGTTGGCTCGCCCCT---CCTC---CTCGTACTTTGTGTAGAGGGCCTCAAACTC 116684 || | | ||| || |||| |||| ||||||||| ||| || ||||| ||||| Sbjct 143459 AGCGTC-TTG---CGGCCCTTGCCCTCACGCTCGTACTTCTCGTACAGAGCCTCGAACTC 143514 Query 116685 TTCACCCACAGC-CTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGAC 116743 || || ||| || | || || || || | || || | ||| | ||| | | Sbjct 143515 CTC-GCCGTAGCAGTCCGCCAGGCCGGGGCACTCGTTGGGGCACATGAGCGTCCAGTCGC 143573 Query 116744 CACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCC 116803 | || |||||||||||||||||| ||||| |||||||| || ||| |||||| || | Sbjct 143574 CGTTCTTCTCAACCCGCTTCATGAACAGGTCCGGGATCCACAGGGCCAGGAAGAGGTCGC 143633 Query 116804 GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCG 116863 | ||| || || | || || || |||| || | || || | | || | Sbjct 143634 GGGCGCGGATCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCGAGGAACTCGAACACGTCGG 143693 Query 116864 CGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGACCAGCCTGGTTTA 116920 ||||||| || |||||||| | || | | || ||| ||| |||||| | Sbjct 143694 CGTGCCATGGCTCCAGGTAGATGGCAAAAGCGCCGGGGCGCTTGTTGCCACCCTGGTCGA 143753 Query 116921 CATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCAT 116980 |||| | ||||| |||||| || || ||||| || | ||| |||| || ||| | Sbjct 143754 CATAGCGTGCCGTGTTGTTAAAAACACGCAGCATGGGCACGATGCCATTGGAGGTGCCGT 143813 Query 116981 TTGT-CCCCCGA-ATACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACC 117038 | || || ||| || ||| | |||| | | |||||||| | || ||||| Sbjct 143814 TGGTGCCGGCGATGTAGGAGCC--CGTGGCACGAATGCGGTGGATGTTGAGGCCGATACC 143871 Query 117039 CCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGA 117098 || ||| ||| || || || || | |||| || ||||||| |||||||| Sbjct 143872 ACCGGCCATCTTGGAAATCATGGCACAGGTCTTGAGGGTGTCGTAGATACCATCGATGCT 143931 Query 117099 GTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCT-TGGTGTACCAGCGT 117157 ||| |||| | ||| ||||||||| |||| || ||||| || || || |||| Sbjct 143932 GTCGTCCTTCATGTCGACGAGGAAGCACGATGACAGCTG-GGCCTGGGGAGTGCCGGCGT 143990 Query 117158 TGAAGAGGGTTGGTGTCGCGTGGATGAA 117185 ||||||| || |||| |||||| |||| Sbjct 143991 TGAAGAGAGTGGGTGAGGCGTGGGTGAA 144018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613505305796520