Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq48 235 9e-57 >seq48 Length=300044 Score = 235 bits (260), Expect = 9e-57 Identities = 464/679 (68%), Gaps = 8/679 (1%) Strand=Plus/Plus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCC 203898 || ||| || |||||||| || | | |||||| | | | | || ||||||||||| Sbjct 142345 CTGGTCGACGGTGAACTGGATAGGCTGGGCGGCAGCCTGGGTGCGGAGGTAGTACATGCC 142404 Query 203899 GGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGG 203958 ||||| ||||| || ||| ||| | ||||||||| | | |||| || | |||| Sbjct 142405 CGTCTTGAGGCCGAGCTTCCAGCCGGCGAAGTGCATGGACGTGATCTTGCCCATGGTGGG 142464 Query 203959 GTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGG 204017 ||| |||||| ||||| || ||||| ||||||||| |||||||| || || || | Sbjct 142465 CTCGCGCATGTGGATGTTGAGCGACTGCGACTGGTCGATG-AAGGCGCCGCGGTCGGCTG 142523 Query 204018 CCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGT 204077 |||| | || | ||| |||||| |||||||| ||||||||| ||| | |||||| Sbjct 142524 CCATCTGGACGACGGTGCGCTGCGAGATCTCCCAGACCGTCTTGTACAGGCGCTTGGTGT 142583 Query 204078 GTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCTC 204136 | || || || | | || || ||| |||||| ||||| || | | || || Sbjct 142584 CCTCGGGGAC-GCTGGCGATGTTCTGGATGGAGCCGCCCTCGGCGATGATGCGGTTCTTC 142642 Query 204137 GTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATC 204196 | | || ||||| ||| | | || ||| ||| | ||| ||||||| || | Sbjct 142643 ATGTTGTCGGACCACAGGCCAAGCTCGACCAGGTCCTTGAGCAGCCACGGGTTGACGACC 142702 Query 204197 TGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCC 204256 || || || |||| ||||| | || | | | |||| ||| | || ||||| | Sbjct 142703 TGGAACTCGCCGGCGAGCACGCGGCGCTGGTAGATGTTGGATGTGTAGGGCTCGAAGCAC 142762 Query 204257 TCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAG 204316 ||||||||||| | ||||| | |||||||| ||||||||||| |||| ||||| ||| Sbjct 142763 TCGTTGTTGCCCAGGATCTGCGACGTGCTGGCTGTGGGCATGGGCGCCACAAGCAGCGAG 142822 Query 204317 TTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCACTG 204376 ||||||||||||| | | || | ||| |||| |||||| || || | | Sbjct 142823 TTGCGCACACCGTGCTGCTTGATGTCGGCCTTGAGAGCCTCCCAGTC--CCAGAGCTCCG 142880 Query 204377 --GGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTGT 204434 || || ||| |||||||||| |||| | ||||| || || || ||||| || Sbjct 142881 ACGGCTTGACGTTCCACATGTCGTACTGCAGAATGCCCTGCGACACAGGCGAGCCCTCGT 142940 Query 204435 ACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGATAGT 204494 |||||| || | | ||| ||||||| ||||||||||| || |||| | || Sbjct 142941 ACGTCGAGTAGGTGCCCTGCTCACGCGCCAGCTCGCACGAGGCGGTCAGGGCGGCGTGGT 143000 Query 204495 ACATGGTCTCAAAGATCTG 204513 | ||||||||||||||||| Sbjct 143001 AGATGGTCTCAAAGATCTG 143019 Score = 163 bits (180), Expect = 5e-35 Identities = 567/869 (65%), Gaps = 12/869 (1%) Strand=Plus/Plus Query 204923 CCCACATGCTGCTGGTTAGACTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATT 204982 |||| | || |||||| ||||||||| ||| ||||||||||| |||||| || | Sbjct 143348 CCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGCATGAAGGGGTTG 143407 Query 204983 CCGTTCTCCATCTGAGA-TCGCAGAATGTGGGTCCACAATTCGCGAGCCTCCACTTGCTT 205041 || |||| |||| | ||| || ||| ||||| | | |||| | ||| Sbjct 143408 CCAGTCTCGGTCTGGGCCTCG-AGGATGGCATACCACAGCTTCTGCGCCTTGAGCGTCTT 143466 Query 205042 CACGTACATCCCTTGAGACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACAC 205101 | | | || | | |||||| || |||||| ||| | || || ||||| Sbjct 143467 GCGGCCCTTGCCCTCACGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCGCCGTAGCA 143526 Query 205102 GTCCATCAGCCCTGGACATTTTTTGGGACACATCAGAGACCACAT-CTGATCGTCTTTCA 205160 |||| ||| || || || | ||||| ||||| || | ||| | | || ||| | Sbjct 143527 GTCCGCCAGGCCGGGGCACTCGTTGGGGCACATGAGCGTCCAGTCGCCGTTCTTCTCA-A 143585 Query 205161 CCCTCTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTC 205220 ||| || ||| |||||||| |||||||||| | || || || ||||| | || Sbjct 143586 CCCGCTTCATGAACAGGTCCGGGATCCACAGGGCCAGGAAGAGGTCGCGGGCGCGGATCT 143645 Query 205221 CGTCGTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGC 205279 | || | || ||||||| || ||| || || || | | |||||||||||| ||| Sbjct 143646 CCTCCTTGCCGTGGTTCTTGCGCAGGTCGAGG-AACTCGAACACGTCGGCGTGCCATGGC 143704 Query 205280 TCTAACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTC 205339 || | | | ||| | ||||| || | |||||| ||||||||||| || ||| | | Sbjct 143705 TCCAGGTAGATGGCAAAAGCGCCGGGGCGCTTGTTGCCACCCTGGTCGACATAGCGTGCC 143764 Query 205340 ATCGCGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTG 205399 | ||| ||||| |||||||| ||||| | || |||| ||| ||||| |||| | | Sbjct 143765 GTGTTGTTAAAAACACGCAGCATGGGCACGATGCCATTGGAGGTGCCGTTGGTGCCGGCG 143824 Query 205400 ATGGCCGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTG 205459 ||| ||||| || | | | | |||| ||| || || || | |||| Sbjct 143825 ATGTAGGAGCCCGTGGCACGAATGCGGTGGATGTTGAGGCCGATACCACCGGCCATCTTG 143884 Query 205460 GCGATCTGGGCGCA-CTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAG 205518 | ||| ||| || ||||| || ||| |||||| || ||||| |||||| || Sbjct 143885 GAAATCATGGCACAGGTCTTG-AGGGTGTCGTAGATACCATCGATGCTGTCGTCCTTCA- 143942 Query 205519 TGTC-ACCAGATAGCACGAAGCCAGCTTGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGG 205577 |||| || || ||||||| | ||||| ||| | ||||| |||| |||||| |||| Sbjct 143943 TGTCGACGAGGAAGCACGATGACAGCTGGGCCTGGGGAGTGCCGGCGTTGAAGAGAGTGG 144002 Query 205578 GGCTGGCGTGGCTGAAGCGCTT-CTCGCTCAAACACCTGTAGGTCTCCAGCACGCTCTCC 205636 | ||||||| ||||| ||| |||| || |||| ||||| ||||||| ||| Sbjct 144003 GTGAGGCGTGGGTGAAGTACTTGCTCG-ACATGAGGTTGTACGTCTCGAGCACGCGCTCA 144061 Query 205637 AGATCGAAGCCGTGAATACCTATGGCGATCCTCATGAAGAGGTGTTGAGGTCTCTCCATC 205696 | | | ||| || || | |||| | ||||| | ||| || || | ||| | Sbjct 144062 ATGTTGTCGCCCCAGATGCCGACAGCGACACGCATGATCATGTGCTGGGGGCGCTCGACG 144121 Query 205697 ACCCTCTCGTTCACCTTGAGCAGATAGGCTCTCTCTAGGGTGCGGATGGCAAAAAAGTTG 205756 | | | ||| | ||||||||| || | | ||| ||||| || | |||| | | | Sbjct 144122 ATCTTGCCGTCGAGCTTGAGCAGGTACGAGCGCTCCAGGGTCTTGAAGCCAAAGTACTGG 144181 Query 205757 AAGGTGTAGTCCCTAGAATAGTCGATGGC 205785 || || |||||| |||| ||||||| Sbjct 144182 TAGTTGAAGTCCCGGTCATAGACGATGGC 144210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795152744958320