Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25]
247 sequences; 50,779,446 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq50 165 8e-36
seq4 134 1e-26
seq1 129 6e-25
>seq50
Length=290317
Score = 165 bits (182), Expect = 8e-36
Identities = 355/517 (69%), Gaps = 14/517 (3%)
Strand=Plus/Minus
Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650
||| || ||| || || || |||||||| ||||| || || || || || || |
Sbjct 113622 CATGACACCAGCCTTCTGGTACTCGCCCACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCC 113563
Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGG---TGCC 132707
|| ||| ||| | ||| ||||| |||||||||| || | |||| |||| ||||
Sbjct 113562 CAGGGAGATGTTCTCCATGAAATCGAAGGGGTTGGATGCGCGGTAGACCTTGTCGTTGCC 113503
Query 132708 GATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGC 132766
|| || | || || || | ||| ||||| ||||||||||| ||| |||| | ||||
Sbjct 113502 GAG-AG--CAACCAGGAGGCGGTCTGCCACAAACTCGATGTACTGCTTCATGAGGTTCG- 113447
Query 132767 AATTAAGTCCCAGCAGACGCAC-CGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCG 132825
| || | || |||||| |||| |||||| || ||||| || || ||||||||| |
Sbjct 113446 AGTTCATACCGAGCAGA-GCACACGGCAGGGCCTCGGTCAGGAACTCTTGCTCGATCTTG 113388
Query 132826 ACCGCGTCGGTGACGATTTCC-CTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTT 132884
|| || ||| || ||| ||| | | | || ||| |||| | | || ||
Sbjct 113387 ACGGCATCGACGATGATCTCCTCGATCATTTGCTT-GCTGGGCCTGTTCTTCATGTGGGA 113329
Query 132885 GAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCT 132944
||| | | ||| ||||||||| |||| |||||| || | || ||||| ||||||
Sbjct 113328 GAAGAGAAGGCAGGCAAAGTCGGTGTGCAGGCCCTCATCACGAGAGATGAGCTCGTTGGA 113269
Query 132945 GAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCC 133004
||| || | ||||||||| |||||||| || || ||||| || || | ||| || ||
Sbjct 113268 GAAGGTAAGGCCGGGCATCAGGCCGCGCTTCTTCAGCCAGAAGATAGAGGCAAAGGCTCC 113209
Query 133005 CGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGT-GGCTT 133063
||||||| ||||||||||| ||||| || | || ||| | | || || | |||
Sbjct 113208 GCTGAAGAAGATACCCTCGACGGCGGCGAAGGCAATGAGTCGCGAGGCAAAGGTCGACTT 113149
Query 133064 CTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTT 133100
| ||| | ||||| ||| ||||| ||||||||
Sbjct 113148 C-TTGTCCGAAATCCACTTCAGAGCCCAGTCGGCCTT 113113
Score = 163 bits (180), Expect = 3e-35
Identities = 202/276 (73%), Gaps = 3/276 (1%)
Strand=Plus/Minus
Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226
|||||||||||| ||| ||| || | || ||||| | ||||||||| ||| |||||
Sbjct 112542 GTAGGTGTCGATCAGGAGCGAGTAGGTCTCAGAGTGGATGTTCTCCATCATGATCTGAAA 112483
Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286
||||| ||||| || |||||| ||||| ||||| ||| ||||| |||| ||
Sbjct 112482 TCCGTAGAAGCAACGGGCCTCGGGAACCTGGACTTCGCCGCTGAAGCGCTCCACCAAGTT 112423
Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346
|||||||||||||| || |||||| || ||||| || | || |||||| |
Sbjct 112422 CTCGTTGACGATGCCATCCGAGGCGGCAAAGAAGGCGAGGATATGTGAGATGAAGTACTT 112363
Query 133347 CTCGTTGTCGTT---CAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403
||| | |||||| | | | ||||||| | ||||||||||||||| | ||||||
Sbjct 112362 CTCATCGTCGTTGAGCTTGTTGTTCCAGTCGTGGAGGTCCTTGGACAGGTCGATCTCCTC 112303
Query 133404 GACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
| | ||||| ||||| |||||||| || ||||||||
Sbjct 112302 GGCTGTCCAGAACGAGGCCTCGGCCTTCTTGTACAT 112267
>seq4
Length=1956354
Score = 134 bits (148), Expect = 1e-26
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||||||||| || |||||| | || || ||| | | |
Sbjct 193212 ATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 193153
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | || || |||| ||||| ||||| || ||| |||||||
Sbjct 193152 GACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAG 193093
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || || | ||| ||||| |||||||| || | ||||| || ||| ||||||
Sbjct 193092 CAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACGCTGTCCGATTACAAC 193033
Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||| ||||| ||| |||||||| ||||||||||| || | || ||
Sbjct 193032 ATCCAGAAGGAGAGC-ACGCTGCACCTGGTGCTGCGTCTGCGTGGTGG 192986
>seq1
Length=4491949
Score = 129 bits (142), Expect = 6e-25
Identities = 168/229 (73%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || | || || ||||||||||| |||| ||||| | ||
Sbjct 3513624 ATGCAGATCTTCGTGAAGACCTTGACTGGAAAAACCATCACGCTCGAAGTCGAATCATCC 3513683
Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|| | | || |||| | |||| || |||| ||||||||||| ||||| | ||||
Sbjct 3513684 GATACGATTGATAACG--TGAAGAGCAAGATCCAGGACAAAGAGGGCATTCCTCCGGACC 3513741
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| ||||| || || | ||||||||| |||||||| || | |||||| | |||||||
Sbjct 3513742 AGCAGCGCCTGATCTTCGCGGGCAAGCAGCTGGAGGATGGCCGCACCTTGTCAGACTACA 3513801
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||| ||||| |||| || || |||| |||||| || | || ||
Sbjct 3513802 ACATCCAGAAGGAGTCGACTCTCCACCTGGTCCTGCGTCTGCGTGGTGG 3513850
Score = 111 bits (122), Expect = 2e-19
Identities = 134/180 (74%), Gaps = 2/180 (1%)
Strand=Plus/Plus
Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGA 38326
|||||||| ||||||||| |||| || ||| | | || | | | | |||| | ||
Sbjct 3512964 ACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCTGATACCATCGACAACG-TCAAGTC 3513022
Query 38327 AAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAA 38386
|| |||| ||||| |||||||| || ||||||| ||||| ||||| | ||| |||||
Sbjct 3513023 CAAGATCCAGGACAAGGAGGGAATCCCTCCCGACCAGCAGCGCCTCATCTTCGCCGGCAA 3513082
Query 38387 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446
||||| || |||| || ||||| |||||||| ||||||||||| | ||||||||
Sbjct 3513083 GCAGCTTGAGGACGGCCGAACCCTTTCGGACTACAATATCCAAAAGGAGTCCACGCTGCA 3513142
Score = 102 bits (112), Expect = 8e-17
Identities = 165/231 (71%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || || ||||| |||||||| | || |||||| | |
Sbjct 3513396 ATGCAGATCTTCGTCAAGACTCTTACCGGCAAGACCATCACGCTGGAAGTCGAGTCATCA 3513455
Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | || |||| | |||| || || | ||||| ||||| || ||| | ||||
Sbjct 3513456 GACACGATTGACAACG--TCAAGAGCAAGATTCAGGACAAGGAGGGCATCCCCCCGGACC 3513513
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| || || | || | |||||||| |||||||| || | |||||||| || ||||
Sbjct 3513514 AGCAACGTTTGATCTTTGCGGGCAAGCAGCTGGAGGATGGTCGCACCCTGTCGGATTACA 3513573
Query 38422 ACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||||| ||||| ||| || || || ||||||| || || | || |||
Sbjct 3513574 ACATCCAGAAGGAGAGC-ACCCTCCACCTGGTGCTTCGCCTGCGCGGTGGC 3513623
Score = 82.4 bits (90), Expect = 8e-11
Identities = 142/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || |||||||| || |||||| | || || ||| | |
Sbjct 3513168 ATGCAAATCTTCGTCAAGACCCTGACGGGCAAGACTATCACCTTGGAGGTGGAGTCTTCG 3513227
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || || || | ||||| ||||| || || |||||||
Sbjct 3513228 GACACCATCGACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGTATCCCGCCCGACCAG 3513287
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || || | || || || || || || || | || || || ||||||||||
Sbjct 3513288 CAGCGCCTGATCTTTGCTGGAAAGCAACTCGAGGATGGTCGGACTCTTTCCGACTACAAC 3513347
Query 38424 ATCCAAAAGGA-AGCGACGCTGCA 38446
|| || ||||| ||| || |||||
Sbjct 3513348 ATTCAGAAGGAGAGC-ACCCTGCA 3513370
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500171255716480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |