Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq48 192 7e-44 seq50 129 7e-25 >seq48 Length=300044 Score = 192 bits (212), Expect = 7e-44 Identities = 956/1502 (64%), Gaps = 43/1502 (3%) Strand=Plus/Minus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 ||| ||| ||||| ||||||| ||||| |||| ||| || || | ||||| || Sbjct 144112 CCCCCAGCACATGATCATGCGTGTCGCTGTCGGCATCTGGGGCGACAACATTGAGCGCGT 144053 Query 111671 TTTGGAGACATACGACAAGATGTCCCGTG-GTATGTTCATCCACGCAACACCAACCCTCT 111729 | ||||| ||| || ||||| | ||| |||| |||||| |||| || |||| Sbjct 144052 GCTCGAGACGTACAACCTCATGTCGAGCAAGTAC-TTCACCCACGCCTCACCCACTCTCT 143994 Query 111730 TCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGG 111789 ||||||| || || || |||| |||| || ||||| | | | ||||| | Sbjct 143993 TCAACGCCGGCACTCCCCAGGCCCAGCTGTCATCGTGCTTCCTCGTCGACATGAAGGACG 143934 Query 111790 ATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTG 111849 | ||| |||| || |||| ||| |||| |||||| || || ||| ||| | Sbjct 143933 ACAGCATCGATGGTATCTACGACACCCTCAAGACCTGTGCCATGATTTCCAAGATGGCCG 143874 Query 111850 GTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGA-GGTAC 111907 |||||||||| | ||||||| | | |||| | ||| || | | || || Sbjct 143873 GTGGTATCGGCCTCAACATCCACCGCATTCGTGCCACG--GGCTCCTACATCGCCGGCAC 143816 Query 111908 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 111967 || || || |||| || | || ||||| || || |||||| ||| || ||||| Sbjct 143815 CAACGGCACCTCCAATGGCATCGTGCCCATGCTGCGTGTTTTTAACAACACGGCACGCTA 143756 Query 111968 TGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATG 112021 ||| |||| | ||| ||| | | || || | || |||| || |||||||| Sbjct 143755 TGTCGACCAGGGTGGCAACAAGCGCCCC---GGCGCTTTTGCCATCTACCTGGAGCCATG 143699 Query 112022 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCG 112081 |||||| || | | |||||||| || |||| ||||| || | |||||| || Sbjct 143698 GCACGCCGACGTGTTCGAGTTCCTCGACCTGCGCAAGAACCACGGCAAGGAGGAGATCCG 143639 Query 112082 GTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 112141 |||||| |||||| || || ||||| || || || ||||||||| | |||||| | Sbjct 143638 CGCCCGCGACCTCTTCCTGGCCCTGTGGATCCCGGACCTGTTCATGAAGCGGGTTGAGAA 143579 Query 112142 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGG 112201 || ||| | ||| | ||| | || || || || ||||| || | || | || Sbjct 143578 GAACGGCGACTGGACGCTCATGTGCCCCAACGAGTGCCCCGGCCTGGCGGACTGCTACGG 143519 Query 112202 TGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC-----G 112256 |||||||| || || || ||| ||||||||| || |||| | || | Sbjct 143518 CGAGGAGTTCGAGGCTCTGTACGAGAAGTACGAGCGTGA-----GGGCAAGGGCCGCAAG 143464 Query 112257 ACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTAC 112315 ||| | | || || || | ||||| | || || ||| || | || ||||||||||| | Sbjct 143463 ACGCT-CAAGGCGCAGAAGCTGTGGTATGCCATCCTCGAGGCCCAGACCGAGACTGGCAA 143405 Query 112316 ACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGT 112375 || | ||||| ||||| ||| ||| |||| ||||| || || ||||| |||| Sbjct 143404 CCCCTTCATGCTGTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGCAC 143345 Query 112376 GATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGC 112435 || || |||||||| || || || ||| | || | | | || ||| ||| Sbjct 143344 CATTCGCAGCTCCAACCTGTGCACCGAGATCATCGAGTACTCGGCGCCCGACGAGGTGGC 143285 Query 112436 TGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA-TCCAGAGACAAAGACAT 112494 |||||| ||||| || || | || || || ||| | | || | || || || | | Sbjct 143284 TGTGTGCAACCTGGCGTCGCTGGCGCTGCCGCAGTTTATCGACTACAACGAGGGAG-CCT 143226 Query 112495 TTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTA 112554 || | | || |||||||| || || | |||| ||||| |||| | | Sbjct 143225 ACGACTTCCAGAAGCTCCACGAGGTGACCCAGGTTGTCGTTCGTAACCTTAACAAGATCA 143166 Query 112555 TTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAA 112614 | || || | ||||| || || ||||| || || ||| | ||| | || | Sbjct 143165 TCGACGTCAACTACTACCCGGTCCAGGAGGCTCGCAACAGCAACATGCGCCACAGGCCCA 143106 Query 112615 TTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTTGAT 112673 | || || || || || ||||| || |||| ||| | | || |||| | || || Sbjct 143105 TCGGCCTGGGCGTGCAGGGTCTGGCTGATGCCTTCCTGGCGCTG-CGCCTGCCCTTCGAG 143047 Query 112674 TCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTT 112733 || ||| || || |||| || || |||||||| || || |||||||| | | Sbjct 143046 TCGCCCGAGGCTCGCGAGCTCAACAAGCAGATCTTTGAGACCATCTACCACGCCGC-CCT 142988 Query 112734 GA--GGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTC 112791 || | | || | ||| |||| | | || | || || | ||||| || | Sbjct 142987 GACCGCCTCGTGC-GAGCTGGCGCGTGAGCAGGGCACCTACTCGACGTACGAGGGCTCGC 142929 Query 112792 CAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGA----GACCAAGCTTCAC 112847 | | || || || | || || | || |||| |||| || | | | |||| | Sbjct 142928 CTGTGTCGCAGGGCATTCTGCAGTACGACATGT-GGAACGTCAAGCCGTCGGAGCT---C 142873 Query 112848 TACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTG 112907 | |||||||| |||||||||| ||||||| || | ||| | || ||| || | Sbjct 142872 TGGGACTGGGAGGCTCTCAAGGCCGACATCAAGCAGCACGGTGTGCGCAACTCGCTGCTT 142813 Query 112908 ATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAA 112967 |||| || ||||| |||||| ||| | || ||| |||| || || || ||||| || Sbjct 142812 GTGGCGCCCATGCCCACAGCCAGCACGTCGCAGATCCTGGGCAACAACGAGTGCTTCGAG 142753 Query 112968 CCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAAC 113027 |||||||| | |||||||| | | | | ||||| || ||||| | | |||||| Sbjct 142752 CCCTACACATCCAACATCTACCAGCGCCGCGTGCTCGCCGGCGAGTTCCAGGTCGTCAAC 142693 Query 113028 AAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTC 113087 | || | | ||||| ||| |||| || |||||| | | |||||| | | | Sbjct 142692 CCGTGGCTGCTCAAGGACCTGGTCGAGCTTGGCCTGTGGTCCGACAACATGAAGAACCGC 142633 Query 113088 AT 113089 || Sbjct 142632 AT 142631 >seq50 Length=290317 Score = 129 bits (142), Expect = 7e-25 Identities = 165/226 (73%), Gaps = 6/226 (3%) Strand=Plus/Plus Query 102109 CAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAGT 102165 |||| ||||| || | ||||| || || |||||| |||||||| || || | |||| Sbjct 113093 CAGTCCCATGCATCCGTAAGAAGGCCGACTGGGCTCTGAAGTGGATTTCGGACAAGAAGT 113152 Query 102166 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 102225 || ||||||| ||||||| | || || || || ||||||||||||||| | Sbjct 113153 CGA---CCTTTGCCTCGCGACTCATTGCCTTCGCCGCCGTCGAGGGTATCTTCTTCAGCG 113209 Query 102226 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 102285 | |||| | |||| | ||||| |||||||| || || ||||| || || ||||| Sbjct 113210 GAGCCTTTGCCTCTATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCCGGCCTTACCTTCT 113269 Query 102286 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 |||||||||| ||||||||||| ||||| || ||| || ||||| Sbjct 113270 CCAACGAGCTCATCTCTCGTGATGAGGGCCTGCACACCGACTTTGC 113315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620740483457840