Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq48 167 3e-36 seq21 109 6e-19 seq50 95.1 1e-14 >seq48 Length=300044 Score = 167 bits (184), Expect = 3e-36 Identities = 1073/1702 (63%), Gaps = 55/1702 (3%) Strand=Plus/Plus Query 109399 GCCTTCGAGCGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGC 109458 |||| | ||| || || ||||| ||||| ||||| || |||||| || | ||| Sbjct 142379 GCCTGGGTGCGGAGGTAGTACATGCCCGTCTTGAGGCCGAGCTTCCAGCCGGCGAAGTGC 142438 Query 109459 ATTGAAGAGAGTTTGGAAAGTGTCGGACTCTC-CATAAACAAGTTCATCGACTGAGACTG 109517 || || | || ||| | || || ||| | ||| | ||| | |||||| ||||| Sbjct 142439 ATGGACGTGATCTTGCCCATGGTGGG-CTCGCGCATGTGGATGTTGAGCGACTGCGACTG 142497 Query 109518 ATCGATGAATCGACCACGATCAGCCGCCATGTCGATGA---TACACTTTTGGCTA-ATTT 109573 |||||||| || || || || ||||| | || || | | || || | || | Sbjct 142498 GTCGATGAAGGCGCCGCGGTCGGCTGCCATCTGGACGACGGTGCGCT----GCGAGATCT 142553 Query 109574 CCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAG 109633 ||||||| |||||||||| |||| | || ||||| | | ||||||| || || | Sbjct 142554 CCCAGACCGTCTTGTACAGGCGCTTGGTGTCCTCGGGGACGCTGGCGATGTTCTGGATGG 142613 Query 109634 AGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGA 109693 |||| || | | ||| | | |||||| | | ||||| || || | || | Sbjct 142614 AGCCGCCCTCGGCGATGATGCGGTTCTTCATGTTGTCGGACCACAGGCCAAGCTCGACCA 142673 Query 109694 GATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGT 109753 | || | | || | |||||| || || || || || || ||| || ||| Sbjct 142674 GGTCCTTGAGCAGCCACGGGTTGACGACCTGGAACTCGCCGGCGAGCACGCGGCGCTGGT 142733 Query 109754 AGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAG 109813 ||||||| | |||||||| ||||| ||||| |||||||| ||||| || | ||| | Sbjct 142734 AGATGTTGGATGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGCGACGTGCTGG 142793 Query 109814 CTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACC-CGCTCA 109872 ||||||||||||| |||| || || ||| || | ||| | | ||| | || | Sbjct 142794 CTGTGGGCATGGGCGCCACAAGCAGCGAGTTGCGCACACCGTGCTGCTTGATGTCGGCCT 142853 Query 109873 CGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGT 109932 | | || ||||| || | || | | | | || | | |||||| || Sbjct 142854 TG-AGAGCCTCCCAGTCCCA--GAGCTCCGAC----GGCTTGACGTTCCACATGTCGTAC 142906 Query 109933 TGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCG 109992 || || | |||| | |||| || |||| | | || ||| | |||| | Sbjct 142907 TGCAGAATGCCCTGCGACACAGGCGAGCCCTCGTACGTCGAGTAGGTGCCCTGCTCACGC 142966 Query 109993 GCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTC 110052 |||| |||| | || || || || || || || || |||||||| || || || Sbjct 142967 GCCAGCTCGCACGAGGCGGTCAGGGCGGCGTGGTAGATGGTCTCAAAGATCTGC---TTG 143023 Query 110053 ATGAG---GCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGA-ATAAACACATCCGC 110108 |||| ||||| ||| | |||||||| || | || | | || |||| || Sbjct 143024 TTGAGCTCGCGAGCCTCGGGCGACTCGAAGGGCAGGCG-CAGCGCCAGGAAGGCATCAGC 143082 Query 110109 TAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTC 110168 |||||||| || || || || ||||| | || |||||| | ||||| | Sbjct 143083 CAGACCCTGCACGCCCAGGCCGATGGGCCTGTGGCGCATGTTGCTGTTGCGAGCCTCCTG 143142 Query 110169 TACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGAT 110228 || ||||| ||||| |||||||| | || || || ||| || || | Sbjct 143143 GACCGGGTAGTAGTTGACGTCGATGATCTTGTTAAGGTTACGAACGACAACCTGGGTCAC 143202 Query 110229 TTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGAGAGC 110288 || ||||| || | | | ||| | | | | | | | || | | | || || || Sbjct 143203 CTCGTGGAGCTTCTGGAAGTCGTAGGCTCCCTCGTTGTAGTCGATAAACTGCGGCAGCGC 143262 Query 110289 AATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGT 110348 | ||||| || |||||||||| |||||| | | ||| || | || || || Sbjct 143263 CAGCGACGCCAGGTTGCACACAGCCACCTCGTCGGGCGCCGAGTACTCGATGATCTCGGT 143322 Query 110349 ACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGC 110408 |||| |||||| || |||| |||| ||||||||| || ||| |||||| Sbjct 143323 GCACAGGTTGGAGCTGCGAATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTG 143382 Query 110409 ATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCA 110468 ||||| || |||||| | ||| | ||||| || ||||| | || ||| ||||| | ||| Sbjct 143383 GTCCTTGTACAGCATGAAGGGGTTGCCAGTCTCGGTCTGGGCCTCGAGGATGGCATACCA 143442 Query 110469 TA-CATCGGCGGCGGGGACAGTTGCGT-TAGCGAGACCTT--CCTC---CTCGTACTTGG 110521 | | || ||| | | |||| | ||| | |||| |||| ||||||||| Sbjct 143443 CAGCTTCTGCGCCTTGA------GCGTCTTGCG-GCCCTTGCCCTCACGCTCGTACTTCT 143495 Query 110522 TGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGAC 110581 ||||| |||| || |||| ||||| || | || || || || ||| | Sbjct 143496 CGTACAGAGCCTCGAACTCCTCGCCGTAGCAGTCCGCCAGGCCGGGGCACTCGTTGGGGC 143555 Query 110582 AGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACA 110641 | | ||| | ||| | || || |||||||| ||||||||||||||| || ||||||| Sbjct 143556 ACATGAGCGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATGAACAGGTCCGGGATCCACA 143615 Query 110642 TCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCA 110701 ||| ||| ||||| ||| || ||| || | || ||||| ||| || || | Sbjct 143616 GGGCCAGGAAGAGGTCGCGGGCGCGGATCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCGA 143675 Query 110702 AAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAG------ACAGCGATGGATCCCT 110755 || || | | || | ||||||||| || || ||| | |||| || | || Sbjct 143676 GGAACTCGAACACGTCGGCGTGCCATGGCTCCAGGTAGATGGCAAAAGCGCCGGGGCGCT 143735 Query 110756 TACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAA 110815 | | | || |||||| ||||||||||| ||| || || || | ||||| || | Sbjct 143736 T--GTTG-CCACCCTGGTCGACATAGCGTGCCGTGTTGTTAAAAACACGCAGCATGGGCA 143792 Query 110816 TAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGT 110875 || |||| ||| || || || || || ||| ||||||||||| || Sbjct 143793 CGATGCCATTGGAGGTGCCGTTGGTGCCGGCGATGTAGGAGCCCGTGGCACGAATGCGGT 143852 Query 110876 GGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTGTGAGTGTA 110934 |||| | | || |||||||| ||| ||| ||| ||||| ||| |||| || Sbjct 143853 GGATGTTGAGGCCGATACCACCGGCCATCTTGGAAATCATGGCACAGGTCT-TGAGGGTG 143911 Query 110935 CCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGA 110994 | || |||||||| || || |||| || | | || ||||| || |||| ||| Sbjct 143912 TCGTAGATACCATCGATGCTGTCGTCCTTCATGTCGACGAGGAAGCACGATGACAGCTGG 143971 Query 110995 GGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTG--GG 111052 | | || || || || |||||||| || |||| || || ||| || |||| | Sbjct 143972 GCCTGGGGAGTGCCGGCGTTGAAGAGAGTGGGTGAGGCGTGGGTGA--AGTACTTGCTCG 144029 Query 111053 ACATCTTGTTGTATGTGTCGAG 111074 |||| |||||| || ||||| Sbjct 144030 ACATGAGGTTGTACGTCTCGAG 144051 >seq21 Length=593538 Score = 109 bits (120), Expect = 6e-19 Identities = 280/418 (67%), Gaps = 15/418 (4%) Strand=Plus/Plus Query 11588 TGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGG 11647 ||| ||| |||||||| || || || | |||||||| ||| || ||||| |||||| Sbjct 385485 TGTTGAAGCCGTCCATCTCGGTCAGGATCTGGTTGAGCGTAGCCTCGCGCTCGTCGTTGC 385544 Query 11648 AGGGCATACCACCTGCCGAA----CGCTTCTTACCGACAGCGTCAATCTCATCGATGAAT 11703 | | ||| ||| | ||| ||| |||| ||||| ||||| |||||||| Sbjct 385545 CGCCGA-ACCGGTGGCCCGAGTCGCGCGACTTGCCGATGGCGTCGATCTCGTCGATGAAG 385603 Query 11704 ACGATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCA 11763 | ||| ||||| ||| ||| |||| |||| || || || || ||| ||| || Sbjct 385604 ATGATGCACGGCGCGTTCTTACGCGCCTCGGCGAACAGGTCCCGCACCCGCGACGCGCCC 385663 Query 11764 ACACCTACGAACATCTCAACGAAGTTTG--CGGCAGAACACTGAATGAAGGGAACATTAG 11821 || || ||||||||||| ||||| | | | || | || ||||| |||||| || | Sbjct 385664 ACGCCAACGAACATCTCGACGAACTCGGACCCGCTG-ACGCTGAA-GAAGGGCACCCCGG 385721 Query 11822 ACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAA 11881 |||| || || | || || || || ||||| ||||| || || | || | || | Sbjct 385722 ACTCGCCCGCCGTCGCCTTGGCCAGCAGCGTCTTGCCCGTTCCGGGGGGCCCCGACAGGA 385781 Query 11882 GGGCGCCACGGGGGATCTTGGCACC--ACTTC-CAAAGTAGCGCTCAGGCTTCTTGAGGA 11938 |||||| || |||||||| || || |||| | || | ||| ||| ||||||||| Sbjct 385782 TGGCGCCGCGCGGGATCTTAGCCCCGAGCTTCTCGAACT---TCTCGGGCGTCTTGAGGA 385838 Query 11939 AGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAGTCGATACCCTCAACATCGGTGAA 11996 || || | ||| | | ||| |||||| ||| || ||| | || || | ||| Sbjct 385839 AGCTGACGAACTCGACGATCTCCAGCTTGGCCTCGTCCATGCCCGCCACGTCCGAGAA 385896 >seq50 Length=290317 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/205 (72%), Gaps = 5/205 (2%) Strand=Plus/Minus Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCC 119554 |||||| || || || || ||||| |||||||||||||| || |||| ||| || Sbjct 113316 GGCAAAGTCGGTGTGCAGGCCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTAAGGCC 113257 Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614 ||||| || || | ||||| ||||| ||||| | ||| ||| |||||||| Sbjct 113256 GGGCATCAGGCCGCGCTTCTTCAGCCAGAAGATAGAGGCAAAGGCTCCGCTGAAGAAGAT 113197 Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGA-GACTTGT-CGAA- 119671 ||||| || |||||| || | || ||| || ||||||||| ||||| |||| Sbjct 113196 ACCCTCGACGGCGGCGAAGGCAATGAGTCGC-GAGGCAAAGGTCGACTTCTTGTCCGAAA 113138 Query 119672 -CCACTTGAGAGCCCAGTTGGCCTT 119695 |||||| |||||||||| |||||| Sbjct 113137 TCCACTTCAGAGCCCAGTCGGCCTT 113113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588974181536600