Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq48 185 1e-41 seq50 104 3e-17 >seq48 Length=300044 Score = 185 bits (204), Expect = 1e-41 Identities = 1143/1809 (63%), Gaps = 41/1809 (2%) Strand=Plus/Plus Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAG 105649 ||||| |||||||| || |||||||| || | ||||| || | ||||| || | | Sbjct 142388 CGGAGGTAGTACATGCCCGTCTTGAGGCCGAGCTTCCAGCCGGCGAAGTGCATGGACGTG 142447 Query 105650 AGCTTGGACATCGTTGGACTTTC-CATGAAAAGATTCAT--ACTTTGACTCTGGTCAATG 105706 | |||| ||| || || || | |||| | || | ||| |||| |||| ||| Sbjct 142448 ATCTTGCCCATGGTGGG-CTCGCGCATGTGGATGTTGAGCGACTGCGACT--GGTCGATG 142504 Query 105707 AAGCGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTTGATTTCCCACACTGTG 105766 ||| || || | || ||||| | | ||| | | ||| ||||| || || Sbjct 142505 AAGGCGCCGCGGTCGGCTGCCATCTGGACGACGGTGCGCTGCGAGATCTCCCAGACCGTC 142564 Query 105767 CGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCC 105826 ||| || |||| | || || |||| | ||| || || || || || ||| | Sbjct 142565 TTGTACAGGCGCTTGGTGTCCTCGGGGACGCTGGCGATGTTCTGGATGGAGCCGCCCTCG 142624 Query 105827 TTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACG 105886 || ||| | | |||||| | | |||||| || |||| || || || |||| Sbjct 142625 GCGATGATGCGGTTCTTCATGTTGTCGGACCACAGGCCAAGCTCGACCAGGTCCTTGAGC 142684 Query 105887 AGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTC 105946 || | |||||| | | ||||| || ||||| | | | | |||||||| | Sbjct 142685 AGCCACGGGTTGACGACCTGGAACTCGCCGGCGAGCACGCGGCGCTGGTAGATGTTGGAT 142744 Query 105947 GTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATT 106006 |||||||| || ||||| || || || |||| ||| || | ||| |||||| ||||| Sbjct 142745 GTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGCGACGTGCTGGCTGTGGGCATG 142804 Query 106007 GGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCC 106066 || |||| | || ||| || | ||| | | ||||||| |||||||| | ||| Sbjct 142805 GGCGCCACAAGCAGCGAGTTGCGCACACCGTGCTGCTTGATGTCGGCCTTGAGAGCCTCC 142864 Query 106067 CAGTCGTAGTTGAGCTT----GGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTG 106122 ||||| || |||| || || || |||| |||| || | || || | || || Sbjct 142865 CAGTCCCAG---AGCTCCGACGGCTTGACGTTCC-ACATGTCGTACTGCAGAATGCCCTG 142920 Query 106123 GGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCT 106182 ||| || || ||||| | ||| |||| || || | |||| || || Sbjct 142921 CGACACAGGCGAGCCCTCGTACGTCGAGTAGGTGCCCTGCTCACGCGCCAGCTCGCACGA 142980 Query 106183 CGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTC 106242 || ||||| ||||| || ||||| |||||||| | || | ||| || || Sbjct 142981 GGCGGTCAGGGCGGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAGCTCGCGAGCCTC 143040 Query 106243 ATCTGAATCAAATGCGTAGCGGCA-CAAAATAAATACATCCGCGAGACCTTGAACACCCA 106301 || || || | | || ||| | | || |||| || ||||| || || |||| Sbjct 143041 GGGCGACTCGAAGG-GCAGGCGCAGCGCCAGGAAGGCATCAGCCAGACCCTGCACGCCCA 143099 Query 106302 AACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTC 106361 || || || ||||| ||||| || || || || || || || || | || Sbjct 143100 GGCCGATGGGCCTGTGGCGCATGTTGCTGTTGCGAGCCTCCTGGACCGGGTAGTAGTTGA 143159 Query 106362 TGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCAT 106421 ||| |||| ||| || || |||| || || | || || || || | Sbjct 143160 CGTCGATGATCTTGTTAAGGTTACGAACGACAACCTGGGTCACCTCGTGGAGCTTCTGGA 143219 Query 106422 AATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGC 106481 | || | | | | | | || | ||| || || || | || |||| |||| Sbjct 143220 AGTCGTAGGCTCCCTCGTTGTAGTCGATAAACTGCGGCAGCGCCAGCGACGCCAGGTTGC 143279 Query 106482 AAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCT 106541 | |||||| ||| || | | |||||| | || || || |||| |||||| || Sbjct 143280 ACACAGCCACCTCGTCGGGCGCCGAGTACTCGATGATCTCGGTGCACAGGTTGGAGCTGC 143339 Query 106542 TAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGT 106601 ||| || |||| ||||| ||||| ||||| |||||| |||||||| |||||| Sbjct 143340 GAATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGCATGA 143399 Query 106602 AGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGT 106660 |||| | || ||||| ||||| | || ||| || || | ||||| | || ||| || | Sbjct 143400 AGGGGTTGCCAGTCTCGGTCTGGGCCTCGAGGATGGCATACCACAGCTTCTGCGCCTTGA 143459 Query 106661 ACAA-TGGCGTTGGCCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCT 106718 | | ||| |||| | ||||| ||||||||| ||| || || || ||||||| Sbjct 143460 GCGTCTTGCG---GCCCTTGCCCTCACGCTCGTACTTCTCGTACAGAGCCTCGAACTCCT 143516 Query 106719 CACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCAC 106778 | || ||| | || || || || || || || | || | ||| | || Sbjct 143517 CGCCGTAGCAGTCCGCCAGGCCGGGGCACTCGTTGGGGCACATGAGCGTCCAGTCGCCGT 143576 Query 106779 CCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTAC 106838 || |||||||||||||||||| ||||| || |||||||||| ||||| || | Sbjct 143577 TCTTCTCAACCCGCTTCATGAACAGGTCCGGGATCCACAGGGCCAGGAAGAGGTCGCGGG 143636 Query 106839 ACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGT 106898 || ||| || | || ||||| || | || |||||||| | | || |||| Sbjct 143637 CGCGGATCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCGAGGAACTCGAACACGTCGGCGT 143696 Query 106899 GCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATTTACA 106954 |||||||||| || |||| || | || || | | | | ||| | || | ||| Sbjct 143697 GCCATGGCTCCAGGTAGATGGCAAAAGCGCCGGGGCGCTTGTTG-CCACCCTGGTCGACA 143755 Query 106955 TAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTT 107014 ||||| || ||| |||||| || || ||||| || | || |||| || || || Sbjct 143756 TAGCGTGCCGTGTTGTTAAAAACACGCAGCATGGGCACGATGCCATTGGAGGTGCCGTTG 143815 Query 107015 GT-CCCCCGA-ATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCC 107072 || || ||| || ||| |||| | | ||||||| | || ||||| | Sbjct 143816 GTGCCGGCGATGTAGGAG--CCCGTGGCACGAATGCGGTGGATGTTGAGGCCGATACCAC 143873 Query 107073 CAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGT 107132 | ||| ||| || || ||||| | | || || | |||||||| | ||| || Sbjct 143874 CGGCCATCTTGGAAATCATGGCACAGGTCTTGAGGGTGTCGTAGATACCATCGATGCTGT 143933 Query 107133 CCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT-TGGTGTACCAGCATTG 107191 | ||||| || ||| |||||||| |||| ||| || || || || || || ||| Sbjct 143934 CGTCCTTCATGTCGACGAGGAAGCACGATGACAGCTG-GGCCTGGGGAGTGCCGGCGTTG 143992 Query 107192 AAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCA 107249 ||||| || |||| ||||| |||| || |||| ||||| || ||| ||||| | Sbjct 143993 AAGAGAGTGGGTGAGGCGTGGGTGAA-GTA-CTTGCTCGACATGAGGTTGTACGTCTCGA 144050 Query 107250 AGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGG 107309 || ||||||| || || |||||||| || |||||||| | ||||| |||| Sbjct 144051 GCACGCGCTCAATGTTGTCGCCCCAGATGCCGACAGCGACACGCATGATCATGTGCTGGG 144110 Query 107310 GTGTTTCCATGAGGATGCCATCGAGCCGTTGA--AGATAGCTCTTCTCAAGGGTTTTGAG 107367 | || | || |||| |||||| |||| || || ||| ||||| |||| Sbjct 144111 GGCGCTCGACGATCTTGCCGTCGAGC--TTGAGCAGGTACGAGCGCTCCAGGGTCTTGAA 144168 Query 107368 ACCAAAGTA 107376 |||||||| Sbjct 144169 GCCAAAGTA 144177 >seq50 Length=290317 Score = 104 bits (114), Expect = 3e-17 Identities = 327/503 (65%), Gaps = 18/503 (4%) Strand=Plus/Minus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 || || || || |||||||| |||||||||||||| || | ||| ||||| ||||| Sbjct 113603 TACTCGCCCACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGGGAGATGTTCTCCATG 113544 Query 117046 AAGTCAAATGGATTC--TTCGCGTTCCAAATGG--GTGGC--ACCCCAACTTGTTTGAGG 117099 || || || || || | |||| | | | | || || | |||| ||| Sbjct 113543 AAATCGAAGGGGTTGGATGCGCGGTAGACCTTGTCGTTGCCGAGAGCAACC------AGG 113490 Query 117100 AGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGA 117159 || || || | |||| |||| ||||||| ||| | ||||||||||||| ||| Sbjct 113489 AGGCGGTCTGCCACAAACTCGATGTACTGCTTCATGAGGTTCGAGTTCATACCGAGCAGA 113430 Query 117160 TTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATG 117219 ||| || || || || | |||| ||| ||| |||| || || || | ||| Sbjct 113429 GCACACGGCAGGGCCTCGGTCAGGAACTCTTGCTCGATCTTGACGGCATCGACGATGATC 113370 Query 117220 GCGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAAC 117279 | | ||| ||| | |||| || || || |||||| |||||| Sbjct 113369 TCCTCGATCATTTGCTTGCTGGGCCTGTTCTTCATGTGGGAGAAGAGAAGGCAGGCAAAG 113310 Query 117280 TCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATG 117339 || ||| || |||||||| || || || || || || |||||| ||||| ||||| Sbjct 113309 TCGGTGTGCAGGCCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTAAGGCCGGGCATC 113250 Query 117340 AGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCC 117399 || || |||||||||| ||| | |||| | || | ||| ||||||||||||||| Sbjct 113249 AGGCCGCGCTTCTTCAGCCAGAAGATAGAGGCAAAGGCTCCGCTGAAGAAGATACCCTCG 113190 Query 117400 ACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTC---AAACCAT 117456 || || || |||| || ||| ||| |||| ||||| |||| || ||| Sbjct 113189 ACGGCGGCGAAGGCAATGAGTCGCGAGGCAAAGG---TCGACTTCTTGTCCGAAATCCAC 113133 Query 117457 TTCATTGCCCATTTCGCCTTCTT 117479 |||| ||||| | |||||||| Sbjct 113132 TTCAGAGCCCAGTCGGCCTTCTT 113110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589978978434280