Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq1 138 3e-27 >seq1 Length=4491949 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || ||| ||| || ||||| ||||| |||| |||||| | ||||| ||| Sbjct 3513376 ACGAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGAAAGAGTCCGACCATCCTCG 3513317 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || ||||| || || ||||| || || || ||||| || || || || || ||||| ||| Sbjct 3513316 AGTTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGA 3513257 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || || |||||||||||| ||||| || | ||| | ||||| Sbjct 3513256 ATCTTCGACTTGACATTGTCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATAGTCTTG 3513197 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| || || ||||| | |||||| Sbjct 3513196 CCCGTCAGGGTCTTGACGAAGATTTGCAT 3513168 Score = 138 bits (152), Expect = 3e-27 Identities = 158/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTC 194990 || ||||| ||||| ||||| || || || ||||| || | |||| || | ||||| || Sbjct 3513832 ACCAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCTGACAAG-GTGCGGCCATCCTC 3513774 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 |||||||| || |||||||| || || || ||||| ||||||||||| |||||||| || Sbjct 3513773 CAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCTTTGTCCTG 3513714 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||| ||||| ||||| || || || ||| ||||| || || | || || Sbjct 3513713 GATCTTGCTCTTCACGTTATCAATCGTATCGGATGATTCGACTTCGAGCGTGATGGTTTT 3513654 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| ||||| || || ||||| | ||||| Sbjct 3513653 TCCAGTCAAGGTCTTCACGAAGATCTGCAT 3513624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109478088837449