Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq48 554 8e-153 seq50 168 1e-36 >seq48 Length=300044 Score = 554 bits (614), Expect = 8e-153 Identities = 1271/1880 (68%), Gaps = 84/1880 (4%) Strand=Plus/Plus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | || | || ||||||| |||||| || ||||||||||| ||||| Sbjct 142352 ACGGTGAACTGGATAGGCTGGGCGGCAGCCTGGGTGCGGAGGTAGTACATGCCCGTCTTG 142411 Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTGTGAGTTTCTTCAGCTTAATATTC 212669 ||||| ||| ||||||| | |||||| | |||| |||| | || Sbjct 142412 AGGCCGAGCTT---CCAGCCGGCGAAGTGCATGGACGTGA---TCTTGCCC-----ATGG 142460 Query 212670 TGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCC 212729 ||| | | || || || | ||| || ||||| |||||| ||||| | | | Sbjct 142461 TGGGC-------TCGCGCATGTGGATGTTGAGCGACTGCGACTGGTCGATGAAGGCGCCG 142513 Query 212730 CTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATT 212789 | ||| || ||||| | | || | ||| |||| |||||| || |||||| | | Sbjct 142514 CGGTCGGCTGCCATCTGGACGACGGTGCGCTGCGAGATCTCCCAGACCGTCTTGTACAGG 142573 Query 212790 TCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCC--CCTGTGT-ATGGTC 212846 ||| |||||| |||| || || ||||||||| | || || ||| | ||| | Sbjct 142574 CGCTTGGTGTCCTCGGGGACGCTGGCGATGTTCTGGATGGAGCCGCCCTCGGCGATGATG 142633 Query 212847 AGCTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCT-CCAGGCACTTGACCAGGTG 212905 | | | ||||| ||| ||| ||||| | || ||||| ||||| ||| Sbjct 142634 CGGTTCTT---CATGTTGTCGGACCACAGGCCAA-GCTCGACCAGGTCCTTGAGCAGCCA 142689 Query 212906 AGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTA 212965 |||||||| | |||||| || || | |||||| | | |||||| | ||| || ||||| Sbjct 142690 CGGGTTGACGACCTGGAACTCGCCGGCGAGCACGCGGCGCTGGTAGATGTTGGATGTGTA 142749 Query 212966 GGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGC 213025 |||||||| || ||||||||| ||||| ||||| | |||||||||||||||||||| || Sbjct 142750 GGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGCGACGTGCTGGCTGTGGGCATGGGCGC 142809 Query 213026 CACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGA-GGCGCCGA-AGCTCTGCCCAG 213083 ||| || || ||| | ||| ||||||| |||| ||| || ||| || ||||| Sbjct 142810 CACAAGCAGCGAGTTGCGCACACCGTGCTGCTTGATGTCGGCCTTGAGAGC-CT-CCCAG 142867 Query 213084 TCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCT 213143 ||||| | ||| | ||| |||||||||||||| |||||| ||||| Sbjct 142868 TCCCAGAGCTCCGACGG---------CTTGACGTTCCACATGTCGTACTGCAGAATGCCC 142918 Query 213144 TTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAG 213203 | ||| || ||||| ||| | ||||||| ||| ||||| ||||||||||| Sbjct 142919 TGCGACACAGGCGAGCCCTCGTACGTCGAGTAGGTGCCCTGCTCACGCGCCAGCTCGCAC 142978 Query 213204 GACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCC 213263 || || |||||| |||| ||||||||| ||||| |||| | ||||||||| ||| Sbjct 142979 GAGGCGGTCAGGGCGGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAGCTCGCGAGCC 143038 Query 213264 TCTGGGGACGTGAAGGGCATCATCATGCGTT-GGAACACATCAGCCAGCCCCTGGACCCC 213322 || || ||| |||||||| || ||| |||| |||||||||| ||||| || || Sbjct 143039 TCGGGCGACTCGAAGGGCAGGCGCA-GCGCCAGGAAGGCATCAGCCAGACCCTGCACGCC 143097 Query 213323 GATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGT 213381 | ||||||||| ||||| | || ||| ||| |||| ||||| | ||||| ||| Sbjct 143098 CAGGCCGATGGGCCTGTGGCGCATGTTGCTGTTGCGAGC-CTCCTGGACCGGGTAGTAGT 143156 Query 213382 TGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACT 213441 || ||||||||||||||| ||||| || | | || | ||| || | | || | || Sbjct 143157 TGACGTCGATGATCTTGTTAAGGTTACGAACGACAACCTGGGTCACCTCGTGGAGCTTCT 143216 Query 213442 CGTGATTGAACACGTAGCCCCCGTCCTGC------ACAAACTCAGGCAGGGCGATGCTGG 213495 | || ||||| | || || | | ||||| ||||| || | | Sbjct 143217 GG------AAGTCGTAGGCTCCCTCGTTGTAGTCGATAAACTGCGGCAGCGCCAGCGACG 143270 Query 213496 CCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGT 213555 |||||||||| || |||||||| | | | | |||||| ||||||||||||||||||| Sbjct 143271 CCAGGTTGCACACAGCCACCTCGTCGGGCGCCGAGTACTCGATGATCTCGGTGCACAGGT 143330 Query 213556 TGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAA-TCCTTG 213614 || || || |||||||||||||||| ||||| ||| ||| | |||| |||||| Sbjct 143331 TGGAGCTGCGAATGGTGCCCAGGTTCTTCTGGTTGCTCTT-GCGGTTGCAGTGGTCCTTG 143389 Query 213615 TAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCT--CCAGAGGT 213672 || |||||| ||||| || ||||| ||||| | | || || ||| ||| || | Sbjct 143390 TACAGCATGAAGGGGTTGCCAGTCTCGGTCTGGGCCTCGAGGAT--GGCATACCACAGCT 143447 Query 213673 ACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGC 213731 | ||||||| | | || | || | | | | | |||||||| ||||| || Sbjct 143448 TCTGCGCCTTGAGC----GTCTTGCGGCCCTTGCCCTCACGCTCGTACTTCTCGTACAGA 143503 Query 213732 TCGTTGAATTCGTGGCCCCAG-ACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAG 213790 | | ||| || | ||| || | | | |||| || || || ||| |||||||| Sbjct 143504 GCCTCGAACTCCTCGCCGTAGCAGTCCG-CCAGGCCGGGGCACTCGTTGGGGCACATGAG 143562 Query 213791 GCTCCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGG 213849 ||||||| |||| | |||| || | || ||||||||||||||||| |||||| || Sbjct 143563 CGTCCAGTCGCCGTTCTTCTCA-ACCCGCTTCATGAACAGGTCCGGGATCCACAGGGCCA 143621 Query 213850 TGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGT 213909 ||| ||||| | || | |||| ||| || ||| |||||||| || || || | Sbjct 143622 GGAAGAGGTCGCGGGCGCGGATCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCGAGGAACT 143681 Query 213910 CAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGC 213966 | || | ||| |||||||| ||||||| |||||||||||| ||||| | || | |||| Sbjct 143682 CGAACACGTCGGCGTGCCATGGCTCCAGGTAGATGGCAAAAGCGCCGGGGCGCTTGTTGC 143741 Query 213967 CGCCCTGGTCCAC-CAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCG 214025 | |||||||| || ||| | ||| |||| || | ||||| | ||| || | || Sbjct 143742 CACCCTGGTCGACATAGCGT-GCCGTGTTGTTAAAAACACGCAGCATGGGCACGATGCCA 143800 Query 214026 TTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAG 214085 ||||| |||||||| || || || || ||||| | ||| | | | | ||| | Sbjct 143801 TTGGAGGTGCCGTTGGTGCCGGCGATGTAGGAGCCCGTGGCACGAATGCGGTGGATGTTG 143860 Query 214086 AGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATG 214145 || || || |||||||| |||||| |||||||| ||| | | | || || ||| Sbjct 143861 AGGCCGATACCACCGGCCATCTTGGAAATCATGGCACAGGTCTTGAGGGTGTCGTAGATA 143920 Query 214146 CCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGAC 214205 || | |||||||| || | | || | | |||||| || ||||||| | || Sbjct 143921 CCATCGATGCTGTCGTCCTTCATGTCGACGAGGAAGCACGATGACAGCTGGGCCTGGGGA 143980 Query 214206 GAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTG 214265 | ||| | |||||| || ||||| ||| ||| | | ||||| | || | ||| || Sbjct 143981 GTGCCGGCGTTGAAGAGAGTGGGTGAGGCGTGGGTGAAGTACTTGCTCGACATGAGGTTG 144040 Query 214266 TAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGC 214325 || ||||| || || |||| || ||| | |||| | ||| | | Sbjct 144041 TACGTCTCGAGCACGCGCTCAATGTTGTCGCCCCAGATGCCGACAGCGACACGCATGATC 144100 Query 214326 ATGTGCTGGGGCCTCTCTATGGGTCCTTTGGGGCC---CTTGAGCAGGTAGGAGCGCTCC 214382 ||||||||||| | ||| | | || ||| | | |||||||||||| ||||||||| Sbjct 144101 ATGTGCTGGGGGCGCTCGA-CGATC--TTGCCGTCGAGCTTGAGCAGGTACGAGCGCTCC 144157 Query 214383 AGAGTCTTGAACCCAAAGTA 214402 || |||||||| |||||||| Sbjct 144158 AGGGTCTTGAAGCCAAAGTA 144177 >seq50 Length=290317 Score = 168 bits (186), Expect = 1e-36 Identities = 350/515 (68%), Gaps = 7/515 (1%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || ||||| | ||||| |||||||| ||||| || ||| ||||||||||| Sbjct 113607 CTGGTACTCGCCCACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGGGAGATGTTCTC 113548 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957 |||||| ||||||||||| || | || ||| |||| ||| | |||| | Sbjct 113547 CATGAAATCGAAGGGGTTGGATGCGCGGTAGACCT-TGTCGTTGCCGAGAGCAACCAGGA 113489 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 || | || || || |||||||||| | ||||||| | |||||| || | || | Sbjct 113488 GGCGGTCTGCCACAAACTCGATGTACTGCTTCATGAGGTTCGAGTTCATACCGAGCAGAG 113429 Query 48018 -ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 |||||| || |||| || || ||||| | ||| |||| ||||| || | | ||| Sbjct 113428 CACACGG-CAGGGCCTCGGTCAGGAACTCTTGCTCGATCTTGACGGCATCGACGATGATC 113370 Query 48077 TGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCA 48136 | || | || ||| |||| || ||| || |||| | ||||||| Sbjct 113369 TCCTCGATCATTTGCTTGCTGGGCCTGTTCTTCATGTG---GGAGAAGAGAAGGCAGGCA 113313 Query 48137 AAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGC 48196 ||||| |||||| ||| || || || ||||||| ||||||||||| || || ||| Sbjct 113312 AAGTCGGTGTGCAGGCCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTAAGGCCGGGC 113253 Query 48197 ATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCC 48256 || | || | || || |||||||| || | || || | || ||||||||| ||| Sbjct 113252 ATCAGGCCGCGCTTCTTCAGCCAGAAGATAGAGGCAAAGGCTCCGCTGAAGAAGATACCC 113193 Query 48257 TCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAG 48316 || || || ||||| || |||| | | | || | | |||||||| || ||||| Sbjct 113192 TCGACGGCGGCGAAGGCAATGAGTCGCGAGGCAAAGGTCGACTTCTTGTCCGAAATCCAC 113133 Query 48317 GAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 || |||||||| |||||||| ||||||||| Sbjct 113132 TTCAGAGCCCAGTCGGCCTTCTTACGGATGCATGG 113098 Score = 98.7 bits (108), Expect = 2e-15 Identities = 172/250 (69%), Gaps = 3/250 (1%) Strand=Plus/Minus Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 |||||||||| | ||||| || |||||| || ||||||||| | |||||| | Sbjct 112516 TCTCAGAGTGGATGTTCTCCATCATGATCTGAAATCCGTAGAAGCAACGGGCCTCGGGAA 112457 Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548 |||| ||||| | ||| | ||||| || ||||| ||||| || ||||| || || | Sbjct 112456 CCTGGACTTCGCCGCTGAAGCGCTCCACCAAGTTCTCGTTGACGATGCCATCCGAGGCGG 112397 Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAG---AGCATTCC 48605 |||||||||| |||| |||| | ||| | ||| | || | |||| |||| Sbjct 112396 CAAAGAAGGCGAGGATATGTGAGATGAAGTACTTCTCATCGTCGTTGAGCTTGTTGTTCC 112337 Query 48606 AGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTT 48665 || | || | ||| ||| |||||| | || || | |||||||| || || || | Sbjct 112336 AGTCGTGGAGGTCCTTGGACAGGTCGATCTCCTCGGCTGTCCAGAACGAGGCCTCGGCCT 112277 Query 48666 TTTTGTACAT 48675 | |||||||| Sbjct 112276 TCTTGTACAT 112267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931529923892480