Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq48 358 1e-93 seq50 113 8e-20 >seq48 Length=300044 Score = 358 bits (396), Expect = 1e-93 Identities = 862/1280 (67%), Gaps = 51/1280 (4%) Strand=Plus/Plus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475 |||||||| |||||||||||||||||||||||| ||||||||| ||| | |||||||| Sbjct 142985 GTCAGGGCGGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAG-CTCGCGAGCCTCGGG 143043 Query 221476 AGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACC 221535 || |||||||| |||||| | | ||| | || ||||| ||||| || || | || Sbjct 143044 CGACTCGAAGGGCAGGCGCAGCGCCAGGAAGGCATCAGCCAGACCCTGCACGCCCAGGCC 143103 Query 221536 GATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACG 221593 |||||||||||| | | ||||| | ||| | || |||| |||| || |||||||| Sbjct 143104 GATGGGCCTGTGGCGCATGTTGCTGTTGCGAGC-CTCCTGGACCGGG-TAGTAGTTGACG 143161 Query 221594 TCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGA 221653 ||||| | ||||| ||||| || || || | ||||||| ||||||||| Sbjct 143162 TCGATGATCTTGTTAAGGTTACGAACGACAACCTGGGTCACCTCGTGGAGCTTCTGGAAG 143221 Query 221654 TTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAA-GCGTTTAGGGCAACGCT 221712 | | | | | || |||| | | || | ||| ||| | || || Sbjct 143222 TCGTA---------GGCTCCCTCGTTGTAG---TCGATAAACTGCGGCAGCGCCAGCGAC 143269 Query 221713 GGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAG 221772 | ||||||| ||||| ||||||||||| | |||| |||||||| || || || Sbjct 143270 G-CCAGGTTGCACACAGCCACCTCGTCGGGCGCCGAGTACTCGATGATCTCGGTGCACAG 143328 Query 221773 GTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCG-TCCT 221831 |||| || ||||| ||||||| || || || |||||| ||| ||| | |||| Sbjct 143329 GTTGGAGCTGCGAATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTG-CAGTGGTCCT 143387 Query 221832 TGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTT 221891 |||| ||||| ||||| ||||||||| ||| ||| | || || | ||| || | Sbjct 143388 TGTACAGCATGAAGGGGTTGCCAGTCTCGGTCTGGGCCTCGAGGATGGCATACCACAGCT 143447 Query 221892 CTCTG-GCGCTCACCGTCCT------CTTGACTGCACCCTCGGTCTTTTCATACCCGGTA 221944 |||| || | | |||| | |||| | ||| |||| ||| || ||| Sbjct 143448 -TCTGCGCCTTGAGCGTCTTGCGGCCCTTGCCCTCACGCTCGTACTTCTCGTAC------ 143500 Query 221945 TAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACAC 222004 ||||| | | |||| || ||||| || ||||||| || ||| | ||| ||| Sbjct 143501 -AGAGCCT--CGAACTCCTCGCCGTAGCAGTCCGCCAGGCCGGGGCACTCGTTGGGGCAC 143557 Query 222005 ATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGC 222064 || || |||||| ||| | | |||| || |||||| ||||||||||||||||| Sbjct 143558 ATGAGCGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATGAACAGGTCCGGGATCCACAGG 143617 Query 222065 GCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAA 222124 ||| | ||||| || | || || ||||||| ||||| ||| || | ||| || | Sbjct 143618 GCCAGGAAGAGGTCGCGGGCGCGGATCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCGAGG 143677 Query 222125 AACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTG 222184 ||||| || | ||| |||||||| |||||||| |||| ||| | ||||||||| |||||| Sbjct 143678 AACTCGAACACGTCGGCGTGCCATGGCTCCAGGTAGATGGCAAAAGCGCCGGGGCGCTTG 143737 Query 222185 TTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAG 222243 ||||||||||| || | ||| | | | | ||| || | || || | || || | Sbjct 143738 TTGCCACCCTGGTCGA-CATAGCGTGCCGTGTTGTTAAAAACACGCAGCATGGGCACGAT 143796 Query 222244 TCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGC 222303 || ||||| ||||||||||| ||||| | || ||| | | | ||| Sbjct 143797 GCCATTGGAGGTGCCGTTGGTGCCGGCGATGTAGGAGCCCGTGGCACGAATG-CGGTGGA 143855 Query 222304 AG-ACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCA 222362 | | ||||||||||||||| || || |||||||| ||| ||||||| ||||| Sbjct 143856 TGTTGAGGCCGATACCACCGGCCATCTTGGAAATCATGGCACAGGTCTTGAGGGTGTCGT 143915 Query 222363 TGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATT 222422 ||| || || || ||| ||||| | || | || || || || |||| ||| | | Sbjct 143916 AGATACCATCGATGCTGTCGTCCTTCATGTCGACGAGGAAGCACGATGACAGCTGGGCCT 143975 Query 222423 TGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCA 222482 || | | |||||| || || ||||| |||||| || ||||| || ||||| | Sbjct 143976 GGGGAGTGCCGGCGTTGAAGAGAGTGGGTGAGGCGTGGGTGAAGTACTTGCTCGACATGA 144035 Query 222483 GATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGAATCTGCATGGCGCATCTC 222541 | | ||||||||| | || | | |||||||| ||| || | | | ||| | | Sbjct 144036 GGTTGTACGTCTCGAGCACGCGCTCAATGTTGTCGCCCCAGATGCCG-ACAGCGACACGC 144094 Query 222542 ATGTACATGTACTGGGGCCTCTCCACAGGAC---CCTTGGAGCTGGAGAGCAGGTACGAT 222598 ||| ||||| |||||| | ||| || | | || | ||||| |||||||||||| Sbjct 144095 ATGATCATGTGCTGGGGGCGCTCGAC-GATCTTGCCGTCGAGCT--TGAGCAGGTACGAG 144151 Query 222599 TTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCG 222658 ||||| |||||||| |||||||| | | || ||||| | | | | || | ||| Sbjct 144152 CGCTCCAGGGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCCCGGTCATAGACGATGGCC 144211 Query 222659 GCGTCCAGCTCCGACTTGTG 222678 | ||| | ||| |||||| Sbjct 144212 GAGTCGAACTCGTCCTTGTG 144231 Score = 123 bits (136), Expect = 5e-23 Identities = 140/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 221065 CATCTCGTCCGTCCATAGACCCCTCTCTTCCAGCACCTTGACCATGTGCTTGTTCACCAC 221124 ||| | ||| | ||| || || ||| |||| |||||| || | ||| || || Sbjct 142642 CATGTTGTCGGACCACAGGCCAAGCTCGACCAGGTCCTTGAGCAGCCACGGGTTGACGAC 142701 Query 221125 TTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGTTCGATGCT 221184 ||||| || || | |||||| | | |||||| | ||| || ||| | || |||| || Sbjct 142702 CTGGAACTCGCCGGCGAGCACGCGGCGCTGGTAGATGTTGGATGTGTAGGGCTCGAAGCA 142761 Query 221185 CTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCAGACT 221244 ||||||||||||||||||||| | ||||||||| ||||||||||| ||||| ||||| Sbjct 142762 CTCGTTGTTGCCCAGGATCTGCGACGTGCTGGCTGTGGGCATGGGCGCCACAAGCAGCGA 142821 Query 221245 GTTGCGCA 221252 |||||||| Sbjct 142822 GTTGCGCA 142829 >seq50 Length=290317 Score = 113 bits (124), Expect = 8e-20 Identities = 333/516 (65%), Gaps = 10/516 (2%) Strand=Plus/Plus Query 25810 CCCA-GCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTAC 25868 |||| ||||| | |||||| ||||| |||||||||| | ||| | || Sbjct 113097 CCCATGCATCCGTAAGAAGGCCGACTGGGCTCTGAAGTGGATTTCGGACAAGAAGTCGAC 113156 Query 25869 GTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT 25928 |||| | ||| || | ||||| || || || ||||| ||||| |||||||| | || Sbjct 113157 CTTTGCCTCGCGACTCATTGCCTTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGAGCCTT 113216 Query 25929 TGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGA 25988 ||| | ||||||||||| ||| || || |||||||| || ||| |||||||| Sbjct 113217 TGCCTCTATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCCGGCCTTACCTTCTCCAACGA 113276 Query 25989 GCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCA 26048 ||||||| | || ||||| || |||| || ||||||||||| |||| | | ||| Sbjct 113277 GCTCATCTCTCGTGATGAGGGCCTGCACACCGACTTTGCCTGCCTTCTCTTCTC---CCA 113333 Query 26049 CTTGCTCCACAAACCTTCTCAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGA 26107 | || ||| || |||| | | || | |||||| || || || ||| Sbjct 113334 CATGAAGAACAGGCC-CAGCAAGCAAATGATCGAGGAGATCATCGTCGATGCCGTCAAGA 113392 Query 26108 TCGAGAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGAC 26167 ||||| | ||||| | | || |||||| | | Sbjct 113393 TCGAGCAAGAGTTCCTGACCGAGGCCCTGCCGTGTGCTCTGCTCGGTATGAACTCGAACC 113452 Query 26168 TCATGAGCCAATACATTGAGTATGTGGCCGACCATCTGCTG--TGCCAGCTGGGACTCGC 26225 |||||| || ||||| |||| |||||| |||| || ||| ||| || || || Sbjct 113453 TCATGAAGCAGTACATCGAGTTTGTGGCAGACCGCCTCCTGGTTGC--TCTCGGCAACGA 113510 Query 26226 CAGACTCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAA 26285 || ||||| | | | ||||| ||||| || ||||| ||||| || ||| || || Sbjct 113511 CAAGGTCTACCGCGCATCCAACCCCTTCGATTTCATGGAGAACATCTCCCTGGGCGGCAA 113570 Query 26286 GACCAACTTCTTTGAAAAGAGGGTCGGCGACTATCA 26321 |||||||||||| || ||| | || ||||| || || Sbjct 113571 GACCAACTTCTTCGAGAAGCGCGTGGGCGAGTACCA 113606 Score = 100 bits (110), Expect = 5e-16 Identities = 181/262 (69%), Gaps = 11/262 (4%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| |||||||||||||||| | ||| |||||| ||||| ||||| || ||| Sbjct 112258 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCGTTCTGGACAGCCGAGGAGATCGACCTG 112317 Query 25537 GCCAAGGACATGGACGGCTGGTAC-----GCTCTATCCAAAGACGAGCAGCATTT--TCT 25589 |||||||| | ||| |||| || |||| | | | || ||| || | || ||| Sbjct 112318 TCCAAGGACCTCCACGACTGGAACAACAAGCTCAA--CGACGATGAGAAGTACTTCATCT 112375 Query 25590 CAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGA 25649 || || | | || |||||||| ||||| ||||| || || |||||||| || || Sbjct 112376 CACATA--TCCTCGCCTTCTTTGCCGCCTCGGATGGCATCGTCAACGAGAACTTGGTGGA 112433 Query 25650 GAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGC 25709 | | |||| | | ||||| ||| |||||| || |||||||| || ||||| Sbjct 112434 GCGCTTCAGCGGCGAAGTCCAGGTTCCCGAGGCCCGTTGCTTCTACGGATTTCAGATCAT 112493 Query 25710 CATCGAAAATGTGCACTCTGAG 25731 || || || | ||||||||| Sbjct 112494 GATGGAGAACATCCACTCTGAG 112515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928841932191680