Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq50 104 3e-17 >seq50 Length=290317 Score = 104 bits (114), Expect = 3e-17 Identities = 327/503 (65%), Gaps = 18/503 (4%) Strand=Plus/Plus Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTTT---GACACAAAGTCTCGCTCCTTCGCCGAG 65079 |||||||| | ||||| |||| ||| || |||| ||||| |||| ||| | Sbjct 113110 AAGAAGGCCGACTGGGCTCTGAAGTGGATTTCGGACAAGAAGTCGA---CCTTTGCCTCG 113166 Query 65080 CGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATT 65139 || || |||| || || || ||||||||||||||| ||| | || | |||| Sbjct 113167 CGACTCATTGCCTTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGAGCCTTTGCCTCTATC 113226 Query 65140 TATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCC 65199 | ||| |||||||||| || || ||||| ||||| |||||| || || || || || Sbjct 113227 TTCTGGCTGAAGAAGCGCGGCCTGATGCCCGGCCTTACCTTCTCCAACGAGCTCATCTCT 113286 Query 65200 CGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTTTGCGTAATAGA 65259 || |||||||| || ||| || |||||| |||||| || || || Sbjct 113287 CGTGATGAGGGCCTGCACACCGACTTTGCCTGCCTTCTCTTCTCCCACATGAAGAACAGG 113346 Query 65260 CCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGGTTC 65319 |||| | ||| ||| | | ||| | || || || |||| ||| ||| |||| Sbjct 113347 CCCAGCAAGCAAATGATCGAGGAGATCATCGTCGATGCCGTCAAGATCGAGCAAGAGTTC 113406 Query 65320 ATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGAGTAC 65379 | || || || || ||| ||| ||||||||||||| | ||| ||||| Sbjct 113407 CTGACCGAGGCCCTGCCGTGTGCTCTGCTCGGTATGAACTCGAACCTCATGAAGCAGTAC 113466 Query 65380 ATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGT--GCCAC--CCATTTGGAA 65435 || |||| |||| | || || ||||| |||| | || || | | | | Sbjct 113467 ATCGAGTTTGTGGCAGACCGCCTCCT------GGTTGCTCTCGGCAACGACAAGGTCTAC 113520 Query 65436 CGCGAA--GAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTC 65493 |||| | || || || || || ||||| ||||| ||| | || |||||||||||| Sbjct 113521 CGCGCATCCAACCCCTTCGATTTCATGGAGAACATCTCCCTGGGCGGCAAGACCAACTTC 113580 Query 65494 TTTGAGAAGCGAGTTGGGGACTA 65516 || |||||||| || || || || Sbjct 113581 TTCGAGAAGCGCGTGGGCGAGTA 113603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596567758091360