Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq12 260 2e-64 seq4 165 1e-35 seq1 156 6e-33 seq10 131 2e-25 >seq12 Length=832401 Score = 260 bits (288), Expect = 2e-64 Identities = 437/629 (69%), Gaps = 11/629 (2%) Strand=Plus/Minus Query 195363 AGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATA 195422 |||||||| | || ||||| || ||||| ||||| || |||| ||| ||||| ||||| | Sbjct 251278 AGATTATCGCCAACGACCAGGGCAACCGCACAACCCCGTCGTTCGTCGCCTTCACAGACA 251219 Query 195423 ATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTG 195482 ||||||||| ||||||||||||| || || ||| || |||||||| ||||| || | Sbjct 251218 CGGAACGTCTCATTGGAGATGCCGCCAAGAACCAGGTCGCCATGAACCCCATCAACACCG 251159 Query 195483 TCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATA 195542 |||| ||||| ||||| || || || |||||||| || | ||||| | ||| | Sbjct 251158 TCTTCGACGCCAAGCGCCTGATCGGCCGCAAGTTCAGCGACGCCGAGGTCCAGGCCGACA 251099 Query 195543 TAAAGGACTGGTCTTATGAAG----TTGTTCCCGGTGTGGCTGATAAGCCTATGATTAAT 195598 | ||| ||| | | | ||| ||| | ||| | || ||||| || | | Sbjct 251098 TGAAGCACTTCCCCT-TCAAGGTCATTGAGCGCGGCG--GC----AAGCCCGTGGTCGAG 251046 Query 195599 GTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTG 195658 || || || | || |||||||| || || | ||||| || | ||||| ||||| || Sbjct 251045 GTCGAGTTCAAGGGCGAGAAGAAGCAGTTCACCCCCGAGGAGGTCTCGTCCATGGTCCTG 250986 Query 195659 ATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTG 195718 | |||||| ||||| || || || | | | || || || || | || || | Sbjct 250985 ACCAAGATGCGCGAGACGGCCGAGTCCTACCTCGGCGGCACCGTTAACAACGCTGTCATC 250926 Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 || || || || ||||||| || || || || ||||| || |||||||||| | || Sbjct 250925 ACCGTCCCCGCCTACTTCAACGACTCCCAGCGCCAGGCCACCAAGGACGCTGGTCTGATC 250866 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 || || || ||| || | || ||||| || || || |||||||| || || || ||| Sbjct 250865 GCCGGCCTGAACGTCCTGCGTATCATCAACGAGCCCACCGCGGCTGCCATCGCCTACGGT 250806 Query 195839 CTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACG 195898 ||||| ||||| || | || || || |||| || ||||| ||||| ||||| Sbjct 250805 CTGGATAAGAAGGTCGAGGGCGAGCGCAACGTCCTGATTTTCGATCTTGGTGGCGGTACC 250746 Query 195899 TTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGT 195958 || ||||| || || || | ||||| | ||||| ||||| || ||| | ||||||||| Sbjct 250745 TTCGATGTTTCGCTCCTGACCATTGAGGAGGGTATTTTCGAGGTCAAGTCGACTGCTGGT 250686 Query 195959 GATACTCATCTAGGTGGTGAAGATTTCGA 195987 || || || || |||||||| || || || Sbjct 250685 GACACCCACCTGGGTGGTGAGGACTTTGA 250657 >seq4 Length=1956354 Score = 165 bits (182), Expect = 1e-35 Identities = 174/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| ||||| || || || ||||||||||| ||||| |||||| Sbjct 193212 ATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 193153 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || |||| ||||||| || || ||||| ||||| || ||||| ||| Sbjct 193152 GACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAG 193093 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || ||||| || ||||| || ||||| || || || | ||||||||| Sbjct 193092 CAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACGCTGTCCGATTACAAC 193033 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTG 172090 | || |||||| || || ||||| || || | || || ||||||| Sbjct 193032 ATCCAGAAGGAGAGCACGCTGCACCTGGTGCTGCGTCTGCGTGGTGGTG 192984 >seq1 Length=4491949 Score = 156 bits (172), Expect = 6e-33 Identities = 513/791 (65%), Gaps = 20/791 (3%) Strand=Plus/Minus Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 || || || |||||||||| || || || ||| | || |||||||||| || || Sbjct 1456483 ACCGTGCCGGCTTACTTCAACGACAACCAGCGTCAGTCCACCAAGGACGCTGGCGCCATC 1456424 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 | || || ||| || | || ||||| || || || || ||||| || || || ||| Sbjct 1456423 TCTGGCCTGAACGTCCTCCGTATCATCAACGAGCCCACTGCCGCTGCCATCGCCTACGGT 1456364 Query 195839 CTGGACAAGAACAAG---GACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895 |||| |||| ||| | || || || |||| | || || ||||||||| Sbjct 1456363 CTGGGTGCCGGCAAGTCGGACAAGGAGCGCAACGTTCTGATTTACGACCTGGGTGGTGGT 1456304 Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955 || || ||||| || || || || || | |||||| | ||| || ||||| || ||| Sbjct 1456303 ACATTCGATGTTTCGCTCCTGAACATCCAGGGTGGTGTTTTCACCGTTAAGGCCACCGCT 1456244 Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCTGAT 196015 ||||| || || || ||||| | |||||||| | || ||| || | | Sbjct 1456243 GGTGACACCCACCTGGGTGGCCAGGATTTCGACACCAACCTCCTCGACCACTGCAAGAAG 1456184 Query 196016 GAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTT 196075 || |||| || |||| ||||| || | || || || | | || || ||| |||| Sbjct 1456183 GACTTCCAGCGCAAGACCAAGAAGGACCTGTCGGGCGATGCCCGTGCCCTCCGTAGGCTC 1456124 Query 196076 AGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACG--GCTCAAACAATGGTTG 196133 ||||| || || || |||||||| | ||||| || | ||| || || || | ||| Sbjct 1456123 AGGACCGCTTGCGAGCGTGCCAAGAGGACTCTGTC--CAACGGTGCCCAGACCACCATTG 1456066 Query 196134 AGATTGATTCGTTGTTTGACGGAATTGACTTCTA--TACAACTATTACCCGTGCACGTTT 196191 |||| || || | || ||||| |||||| | | || ||||||||||| | || Sbjct 1456065 AGATCGACTCCCTCTTCGACGGCGAGGACTTCAACCTGCA--GATTACCCGTGCTAGGTT 1456008 Query 196192 TGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTA---TGGAACCTGTTGAACAAGTACT 196248 ||| ||| | ||| ||| || ||| | | | || ||||| || || || Sbjct 1456007 TGAGGAGCTGAACGCTGCCGCCTT---CAAGGGCACCCTCGAGCCTGTCTCTCAGGTTCT 1455951 Query 196249 TCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAAC 196308 | ||||| || || ||||| ||||| || || ||||| || || || || || Sbjct 1455950 TAAGGACGCCGCTATCGAGAAGTCGGCTGTTGACGAGATCGTCCTGGTCGGCGGCTCGAC 1455891 Query 196309 CCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAA 196368 |||||| || || || || |||| || ||||| | || | | | || Sbjct 1455890 CCGTATCCCCCGTATCCAGAAGCTGCTGTCCGAGTTCTTTGACGGCAAGAAGCTCGAGAA 1455831 Query 196369 AACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTC 196428 | |||||||| ||||| || || || ||||||||||| |||||||| | | |||| || Sbjct 1455830 GAGCATCAACCCCGATGAGGCCGTGGCCTATGGTGCGGCTGTTCAGGCCGGTGTTCTTTC 1455771 Query 196429 AGGTGTTGACA---ATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATC 196485 || | || | | || | || || ||||| || ||||| || ||| |||| Sbjct 1455770 GGGCAAGGCCACGTCTGCTGACACCAGCGACCTGCTGCTGCTCGATGTCGCCCCCCTATC 1455711 Query 196486 CCTGGGTCTTG 196496 ||||||| ||| Sbjct 1455710 CCTGGGTGTTG 1455700 Score = 156 bits (172), Expect = 6e-33 Identities = 163/214 (76%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||||||||| || || ||||| || || || ||||||||| | ||||| ||||| | Sbjct 3513166 GTATGCAAATCTTCGTCAAGACCCTGACGGGCAAGACTATCACCTTGGAGGTGGAGTCTT 3513225 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | ||||| ||||| || |||| | |||||||| || ||||| || || || ||||| | Sbjct 3513226 CGGACACCATCGACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGTATCCCGCCCGACC 3513285 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 |||| || || || |||||||| || || || || ||||| || || || | || |||| Sbjct 3513286 AGCAGCGCCTGATCTTTGCTGGAAAGCAACTCGAGGATGGTCGGACTCTTTCCGACTACA 3513345 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 || |||| |||||| || || ||||| || || Sbjct 3513346 ACATTCAGAAGGAGAGCACCCTGCACCTCGTCCT 3513379 Score = 152 bits (168), Expect = 7e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| ||| | ||||||||||| ||||| ||||| || || || || Sbjct 3513624 ATGCAGATCTTCGTGAAGACCTTGACTGGAAAAACCATCACGCTCGAAGTCGAATCATCC 3513683 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || || |||||| | || |||||| || || || || |||||||| || || ||| Sbjct 3513684 GATACGATTGATAACGTGAAGAGCAAGATCCAGGACAAAGAGGGCATTCCTCCGGACCAG 3513743 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||||| || ||||| || ||| | | || |||||| Sbjct 3513744 CAGCGCCTGATCTTCGCGGGCAAGCAGCTGGAGGATGGCCGCACCTTGTCAGACTACAAC 3513803 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || |||||||| ||||| ||||| || || | || || ||||| Sbjct 3513804 ATCCAGAAGGAGTCGACTCTCCACCTGGTCCTGCGTCTGCGTGGTGG 3513850 Score = 138 bits (152), Expect = 1e-27 Identities = 153/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 || || || || |||||||||||||| ||||| || || || ||||| ||| |||| || Sbjct 3512964 ACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCTGATACCATCGACAACGTCAAGTCC 3513023 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 ||||| || || ||||| || || || ||||| ||||| || || || || || || || Sbjct 3513024 AAGATCCAGGACAAGGAGGGAATCCCTCCCGACCAGCAGCGCCTCATCTTCGCCGGCAAG 3513083 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 |||||||| || || || ||||| | || ||||| | ||||||||||| || || ||| Sbjct 3513084 CAGCTTGAGGACGGCCGAACCCTTTCGGACTACAATATCCAAAAGGAGTCCACGCTGCAC 3513143 Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089 || || || | || || || ||| Sbjct 3513144 CTCGTCCTCCGCCTCCGTGGAGGT 3513167 >seq10 Length=1070767 Score = 131 bits (144), Expect = 2e-25 Identities = 138/182 (76%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 171870 CTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAAT 171929 ||| ||||| ||||||||||| || || ||||| || ||||| ||||| || ||||| || Sbjct 547586 CTTCGTGAAGACCCTTACTGGCAAGACCATCACTCTGGAGGTCGAGTCCTCGGACACGAT 547527 Query 171930 CGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACT 171989 ||| || | || ||||||| || || ||||| || || || ||||| ||||| || || Sbjct 547526 CGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGTATCCCTCCCGACCAGCAGCGTCT 547467 Query 171990 TATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAA 172049 ||||| ||||| || |||||||| || || || || || | || ||||| | || || Sbjct 547466 CATTTTCGCTGGCAAGCAGCTTGAGGACGGCCGGACTCTGTCCGACTACAATATCCAGAA 547407 Query 172050 GG 172051 || Sbjct 547406 GG 547405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657860368849840