Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq1 113 9e-20 >seq1 Length=4491949 Score = 113 bits (124), Expect = 9e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || | |||||| || || ||||| || || || || || ||| | | ||| Sbjct 3513382 CGGAGGACGAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGAAAGAGTCCGACCA 3513323 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || ||||| |||||||||||||| || | || || || || || || || ||||| Sbjct 3513322 TCCTCGAGTTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCGGGCGGGATACCCTCCTTG 3513263 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 || |||||||| | || ||||| || || || || || || || ||||| || || Sbjct 3513262 TCCTGAATCTTCGACTTGACATTGTCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATA 3513203 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| |||| ||||| || || || ||||| Sbjct 3513202 GTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 3513168 Score = 98.7 bits (108), Expect = 2e-15 Identities = 165/236 (70%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 82576 ATCACCTACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTAT 82635 ||||| || || | || |||||| || | ||| ||||| || || ||||| || || | Sbjct 3513858 ATCACTGTCCACCACGCAGACGCAGGACCAGGTGGAGAGTCGACTCCTTCTGGATGTTGT 3513799 Query 82636 AATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGAT 82695 | || || | | | || || || || || || || || ||||| || | || || | Sbjct 3513798 AGTCTGACAAGGTGCGGCCATCCTCCAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGT 3513739 Query 82696 CTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTT-ACATTTTCAATCGTATCATTA 82754 | ||||| || || || || || || ||||| ||| || || || ||||||||||| Sbjct 3513738 CCGGAGGAATGCCCTCTTTGTCCTGGATCTT-GCTCTTCACGTTATCAATCGTATCGGAT 3513680 Query 82755 GGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | ||| ||||| | || || || || || ||||| ||||| || || |||||||| Sbjct 3513679 GATTCGACTTCGAGCGTGATGGTTTTTCCAGTCAAGGTCTTCACGAAGATCTGCAT 3513624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981824092823733