Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq2 127 2e-24 >seq2 Length=2981670 Score = 127 bits (140), Expect = 2e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 146872 ATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACG 146931 |||| ||| | |||||||| ||||| | | | ||||| | ||||| || ||| Sbjct 1776795 ATCTCGAGGTCCGGGAAGGGGCGGGGCTCGCGCTCGAGCTGGGTGCGCAGGGCGTCGACG 1776854 Query 146932 TGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCG 146991 |||| || ||||||||| ||||| |||| | ||| | ||| ||| ||| || Sbjct 1776855 TGGTCGACGTAGACGTGGGCGTCGCCCATGACGTGGGTCAGCGACCCGGGCACGAGGTCG 1776914 Query 146992 GTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCC 147051 ||||||| | ||||| || |||||||||||||| || ||||||||||| || ||| Sbjct 1776915 CAGGCGTGGGCGAGCATGTGCGTCAGCAGCGAGTAGCTCGCGATGTTGAAGGGCACGCCC 1776974 Query 147052 AGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCA 147086 ||||||||||| | |||| |||||| |||||||| Sbjct 1776975 AGGCCCATGTCGCAGGACCGCTGGTAGAGCTGGCA 1777009 Score = 100 bits (110), Expect = 3e-16 Identities = 124/170 (73%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 147232 AGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAG 147291 |||||||| |||||||| || | ||||| ||| |||| |||| ||| |||||| Sbjct 1777299 AGCTGGTCGACGCCCTGTCCGCTGTAGTCGGTCTTTGCGTCCTTGTACTCGGCGCCAAAG 1777358 Query 147292 TGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCC 147351 || | ||||||||||||||| || || || ||||||||| | | ||| | |||| Sbjct 1777359 TGGCGCCACTGGAAGCCGTAGACGGGGCCGAGGTCGCCGACGTCGCGGTGGTGCAGGCCC 1777418 Query 147352 GCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCC 147401 | | ||| |||||| | ||||||| | |||||||||||| ||| || Sbjct 1777419 AGCGAGTCGAGGAACTCGCGCGACCCGTTGCCGTCCCAGATGCGCACCCC 1777468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583486198480800