Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq48 172 6e-38 seq1 114 1e-20 >seq48 Length=300044 Score = 172 bits (190), Expect = 6e-38 Identities = 900/1422 (63%), Gaps = 41/1422 (3%) Strand=Plus/Minus Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623 || |||||| | |||| || || || ||||| ||||| ||||||| || | Sbjct 144108 CAGCACATGATCATGCGTGTCGCTGTCGGCATCTGGGGCGACAACATTGAGCGCGTGCTC 144049 Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCC 7683 || |||||| | | ||||| || | || || ||||| || ||||| | || | Sbjct 144048 GAGACGTACAACCTCATGTCGAGCAAGTACTTCACCCACGCCTCACCCACTCTCTTCAAC 143989 Query 7684 GCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGC 7743 || ||||| | | | || |||| ||||| || | | |||| || |||||| Sbjct 143988 GCCGGCACTCCCCAGGCCCAGCTGTCATCGTGCTTCCTCGTCGACATGAAGGACGACAGC 143929 Query 7744 ATCGACGGCATTTACAACACGCTGCGCGA-TTGCGCCAATATTTCCAAATACGGCGGCGG 7802 ||||| || || ||| |||| || | || || |||| |||||||| | ||| || Sbjct 143928 ATCGATGGTATCTACGACACCCT-CAAGACCTGTGCCATGATTTCCAAGATGGCCGGTGG 143870 Query 7803 AATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGG 7862 || || || ||| | || | | || |||| || | ||||| ||||||||| Sbjct 143869 TATCGGCCTCAACATCCACCGCATTCGTGCCACGGGCTCCTACATCGCCGGCACCAACGG 143810 Query 7863 AAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGA 7922 | ||| || | | ||||||| |||| || || || ||| ||| || |||| || Sbjct 143809 CACCTCCAATGGCATCGTGCCCATGCTGCGTGTTTTTAACAACACGGCACGCTATGTCGA 143750 Query 7923 CCAGGGGGG---AAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGA 7979 |||||| || |||||| ||||| ||||||||| ||||||| |||||||| || Sbjct 143749 CCAGGGTGGCAACAAGCGCCCCGGCGCTTTTGCCATCTACCTGGAGCCATGGCACGCCGA 143690 Query 7980 CATTTACGCAGTGCTAAATCTGCGTCGCAACATGGGTTGCGAAGACAGCAAAGCGCGCGA 8039 | | | || | || | ||||| ||| || || || | | || ||||| Sbjct 143689 CGTGTTCGAGTTCCTCGACCTGCGCAAGAACCACGGCAAGGAGGAGATCCGCGCCCGCGA 143630 Query 8040 TCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACGCACA 8099 || ||| | | ||||| | || || ||||| |||| ||| ||| | ||| | Sbjct 143629 CCTCTTCCTGGCCCTGTGGATCCCGGACCTGTTCATGAAGCGGGTTGAGAAGAACGGCGA 143570 Query 8100 ATGGTCGCTCATGTGCCCCGATCGTTGCCCTTTATTAAAAAACGTTTACGGTTCAAAATT 8159 ||| |||||||||||||| | ||||| | || ||||| | || Sbjct 143569 CTGGACGCTCATGTGCCCCAACGAGTGCCCCGGCCTGGCGGACTGCTACGGCGAGGAGTT 143510 Query 8160 TGAACAATTGTACAAACAATACGAACACGACGGCGCGTACGTGCGGCAAG----TGAAAG 8215 || ||||| | | ||||| | || ||| | | || ||||| | || | Sbjct 143509 CGAGGCTCTGTACGAGAAGTACGAGCGTGAGGGC----AAGGGCCGCAAGACGCTCAAGG 143454 Query 8216 CGCGCGACCTGCACCGCGCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGC 8275 ||| | ||| ||||| |||| || | ||| || || | || | ||||| Sbjct 143453 CGCAGAAGCTGTGGTATGCCATCCTCGAGGCCCAGACCGAGACTGGCAACCCCTTCATGC 143394 Query 8276 TGTACAAAGACGCTTGCAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCA 8335 ||||||| ||| |||||| ||| ||||| || | ||| ||||||||||| | || Sbjct 143393 TGTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGCACCATTCGCAGCT 143334 Query 8336 GCAATCTGTGCGCTGAAATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAATC 8395 ||| |||||| | || || | ||||| ||||||||||| ||||| || ||||| | Sbjct 143333 CCAACCTGTGCACCGAGATCATCGAGTACTCGGCGCCCGACGAGGTGGCTGTGTGCAACC 143274 Query 8396 TAGCGTCGGTGTGTTTAAACGCGTTCGTTGATCGACGCTCAAACA-----CTTACGACTT 8450 | |||||| || | || ||| |||||| ||| | | |||||||| Sbjct 143273 TGGCGTCGCTGGCGCT----GCCGCAGTTTATCGAC-TACAACGAGGGAGCCTACGACTT 143219 Query 8451 TGAACAATTGAAAAACGCCGTG---CAAGTGACGGTACGCAATTTAGATCGCATCATTGA 8507 || | ||| ||| || || || || || | | ||||| || Sbjct 143218 ---CCAGAAGCTCCACGAGGTGACCCAGGTTGTCGTTCGTAACCTTAACAAGATCATCGA 143162 Query 8508 TGTCAATTTTTATCCCTTGGAAGAAGCGCGCGTATCGAACATGCGCCACAGACCCGTTGG 8567 ||||| | || || | | || || ||| |||||||||||||| ||| | || Sbjct 143161 CGTCAACTACTACCCGGTCCAGGAGGCTCGCAACAGCAACATGCGCCACAGGCCCATCGG 143102 Query 8568 CGTGGGCGTGCAAGGTCTGGCCGACGCGTT--TGCCATGTTGCGCCTCCCCTACGAAAGC 8625 | |||||||||| |||||||| || || || || | | ||||||| |||| ||| Sbjct 143101 CCTGGGCGTGCAGGGTCTGGCTGATGCCTTCCTGGC--GCTGCGCCTGCCCTTCGAGTCG 143044 Query 8626 CAAGAAGCGCGCATGCTCAACATAAAAATAGCGGAAACGGTGTATTACGGCGCATTAGAA 8685 | || || ||| |||||||| | || || || | || ||| ||| | Sbjct 143043 CCCGAGGCTCGCGAGCTCAACAAGCAGATCTTTGAGACCATCTACCACGCCGCCCTGACC 142984 Query 8686 GCCAGCTGTCAACTTGCCCGAGAATTGGGCACGTACGAATCGTACGCGGGCAGCCCTGCC 8745 ||| || | || || || || |||||| ||| |||||| |||| |||| Sbjct 142983 GCCTCGTGCGAGCTGGCGCGTGAGCAGGGCACCTACTCGACGTACGAGGGCTCGCCTG-- 142926 Query 8746 AGCCGC--GGAATATTGCAATACGACATGTGGAATGTCACGCC--CACCTCTTTGTGGAA 8801 | ||| || || |||| |||||||||||||| |||| ||| | || || ||| Sbjct 142925 TGTCGCAGGGCATTCTGCAGTACGACATGTGGAACGTCAAGCCGTCGGAGCTCTG-GGAC 142867 Query 8802 TTGGAGCGATTTGAAACGCAAAATTGCTCAATTCGGTTTGCGCAATTCGCTGTTGGTGGC 8861 | |||| | | | || | | || || |||| ||||||| |||||| | ||||| Sbjct 142866 TGGGAG-GCTCTCAAGGCCGACATCAAGCAGCACGGTGTGCGCAACTCGCTGCTTGTGGC 142808 Query 8862 TTACATGCCCACCGCCACGACTGCTCAAATAATGGGAAACAACGAATCCTTTGAGCCGTT 8921 ||||||||| |||| || | || || |||| |||||||| | ||| ||||| | Sbjct 142807 GCCCATGCCCACAGCCAGCACGTCGCAGATCCTGGGCAACAACGAGTGCTTCGAGCCCTA 142748 Query 8922 CACCAACAACGTGTACGTGAGACGAGTGTTGGCCGGCGATTT 8963 ||| |||| | ||| | | || ||| | |||||||| || Sbjct 142747 CACATCCAACATCTACCAGCGCCGCGTGCTCGCCGGCGAGTT 142706 >seq1 Length=4491949 Score = 114 bits (126), Expect = 1e-20 Identities = 166/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 134483 CTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC 134542 || ||| || | || |||| || ||||| || || || ||||| || ||||||||||| Sbjct 3513854 CTGTCCACCACGCAGACGCAGGACCAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTC 3513795 Query 134543 -GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGG 134601 | ||| |||| | || || ||||| ||||| || || |||| |||||||| || | Sbjct 3513794 TGACAA-GGTGCGGCCATCCTCCAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCCG 3513736 Query 134602 GCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATT 134661 | || ||||| ||||| || || || || || || || | || ||||| |||| Sbjct 3513735 GAGGAATGCCCTCTTTGTCCTGGATCTTGCTCTTCACGTTATCAATCGTATCGGATGATT 3513676 Query 134662 CCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | || ||||| || |||||||| || || || || || ||||| || ||||| Sbjct 3513675 CGACTTCGAGCGTGATGGTTTTTCCAGTCAAGGTCTTCACGAAGATCTGCAT 3513624 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | |||||||| || ||| ||||| ||||||||||||||| | Sbjct 3513394 CCGCCACGGAGGCGGAGGACGAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGAA 3513335 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || || || ||||| || || || ||||| |||| |||||||| |||||||| Sbjct 3513334 AGAGTCCGACCATCCTCGAGTTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCGGGCGGG 3513275 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || ||||| || ||||| ||| | ||||| || || ||||| Sbjct 3513274 ATACCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTGTCCGAAGACTCCACC 3513215 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || || || || || || | || || ||||| |||||||| Sbjct 3513214 TCCAAGGTGATAGTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 3513168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505396839582440