Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq50 87.8 2e-12 >seq50 Length=290317 Score = 87.8 bits (96), Expect = 2e-12 Identities = 175/257 (68%), Gaps = 3/257 (1%) Strand=Plus/Minus Query 39914 TCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATT 39973 || || |||||||| || ||| |||||||||||||| || || | || || | || Sbjct 112514 TCAGAGTGGATGTTCTCCATCATGATCTGAAATCCGTAGAAGCAACGGGCCTCGGGAACC 112455 Query 39974 TGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCA 40033 || || || | || | ||| |||| || || || || || ||||| |||||| Sbjct 112454 TGGACTTCGCCGCTGAAGCGCTCCACCAAGTTCTCGTTGACGATGCCATCCGAGGCGGCA 112395 Query 40034 AAAAATGCCAATACATGTTTAATAAAATATTTTTCATCG--GGTG-TCAATTTATTCCAG 40090 || || || | | |||| || || || || |||||| | || | || |||||| Sbjct 112394 AAGAAGGCGAGGATATGTGAGATGAAGTACTTCTCATCGTCGTTGAGCTTGTTGTTCCAG 112335 Query 40091 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTT 40150 || | || || || || | || | || || |||||||| ||||| ||||| ||||| Sbjct 112334 TCGTGGAGGTCCTTGGACAGGTCGATCTCCTCGGCTGTCCAGAACGAGGCCTCGGCCTTC 112275 Query 40151 TTGTACATGTTCCATAT 40167 |||||||| | ||| || Sbjct 112274 TTGTACATCTGCCAGAT 112258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686906679169080