Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq48 210 3e-49 >seq48 Length=300044 Score = 210 bits (232), Expect = 3e-49 Identities = 1170/1842 (64%), Gaps = 43/1842 (2%) Strand=Plus/Plus Query 110331 TGAACTGAATTGGTCGGGCTTTCGCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTC 110390 ||||||| || || |||| |||| | ||||| |||||||| || |||||||| | Sbjct 142356 TGAACTGGATAGGCTGGGCGGCAGCCTGGGTGCGGAGGTAGTACATGCCCGTCTTGAGGC 142415 Query 110391 CTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTC-CATG 110449 | | ||||| || | ||||| || | || |||| ||| || || || | |||| Sbjct 142416 CGAGCTTCCAGCCGGCGAAGTGCATGGACGTGATCTTGCCCATGGTGGG-CTCGCGCATG 142474 Query 110450 AAGAGGTTCAT--ACTTTGACTTTGGTCAATGAAG-CGCCCCCGTTGTGCCGCCATATCA 110506 || ||| | ||| |||| |||| |||||| |||| | || | || ||||| | Sbjct 142475 TGGATGTTGAGCGACTGCGACT--GGTCGATGAAGGCGCCGCGGTCG-GCTGCCATCTGG 142531 Query 110507 ATGACATCCTTCATCTTAATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTGGG 110566 | ||| | | || ||||| || || || || |||| | || || ||| Sbjct 142532 ACGACGGTGCGCTGCGAGATCTCCCAGACCGTCTTGTACAGGCGCTTGGTGTCCTCGGGG 142591 Query 110567 ATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACCATGAGATCCTTCATATCCTTG 110626 | | ||| ||||||||||| || ||| | | ||| | | |||||| | | | Sbjct 142592 ACGCTGGCGATGTTCTGGATGGAGCCGCCCTCGGCGATGATGCGGTTCTTCATGTTGTCG 142651 Query 110627 GACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAACTCA 110686 ||||| || |||| || ||||| |||| || | |||||| | ||||| Sbjct 142652 GACCACAGGCCAAGCTCGACCAGGTCCTTGAGCAGCCACGGGTTGACGACCTGGAACTCG 142711 Query 110687 CCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTA 110746 || ||||| | | | |||||||||| | |||||| || || ||||| || || || Sbjct 142712 CCGGCGAGCACGCGGCGCTGGTAGATGTTGGATGTGTAGGGCTCGAAGCACTCGTTGTTG 142771 Query 110747 CCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGA 110806 |||| ||| || | ||| |||||| ||||| || |||| | || ||| || | | Sbjct 142772 CCCAGGATCTGCGACGTGCTGGCTGTGGGCATGGGCGCCACAAGCAGCGAGTTGCGCACA 142831 Query 110807 CCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCT----TGGTTTC 110862 || | || ||||||| |||||||| | |||||||| | ||||| || || Sbjct 142832 CCGTGCTGCTTGATGTCGGCCTTGAGAGCCTCCCAGTCCCA---GAGCTCCGACGGCTTG 142888 Query 110863 ACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTC 110922 || || ||||||||| |||| || | || || ||| | || || ||||| | || Sbjct 142889 ACGTT-CCACATGTCGTACTGCAGAATGCCCTGCGACACAGGCGAGCCCTCGTACGTCGA 142947 Query 110923 ATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGT 110982 |||| || || | |||| || || || ||||| ||||| || ||||| Sbjct 142948 GTAGGTGCCCTGCTCACGCGCCAGCTCGCACGAGGCGGTCAGGGCGGCGTGGTAGATGGT 143007 Query 110983 TTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCA-CA 111041 |||||||| | || | ||| || || || || || | | || ||| | Sbjct 143008 CTCAAAGATCTGCTTGTTGAGCTCGCGAGCCTCGGGCGACTCGAA-GGGCAGGCGCAGCG 143066 Query 111042 AAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAG 111101 | || |||| || ||||| || || |||| || || || ||||| ||||| || Sbjct 143067 CCAGGAAGGCATCAGCCAGACCCTGCACGCCCAGGCCGATGGGCCTGTGGCGCATGTTGC 143126 Query 111102 ACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGG 111161 || || || || || || || | || ||| |||| ||| || || Sbjct 143127 TGTTGCGAGCCTCCTGGACCGGGTAGTAGTTGACGTCGATGATCTTGTTAAGGTTACGAA 143186 Query 111162 TAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGA 111221 |||| || || | || || || || | | || | | | | | | || Sbjct 143187 CGACAACCTGGGTCACCTCGTGGAGCTTCTGGAAGTCGTAGGCTCCCTCGTTGTAGTCGA 143246 Query 111222 CATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGT 111281 | ||| || || || | || |||| ||||| |||||| ||| || | | || Sbjct 143247 TAAACTGCGGCAGCGCCAGCGACGCCAGGTTGCACACAGCCACCTCGTCGGGCGCCGAGT 143306 Query 111282 ACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTAC 111341 |||| | || || || || | |||||| || ||| || |||| ||||| ||||| | Sbjct 143307 ACTCGATGATCTCGGTGCACAGGTTGGAGCTGCGAATGGTGCCCAGGTTCTTCTGGTTGC 143366 Query 111342 TCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATT 111401 |||| |||||| |||||||| |||||| |||| | || ||||| ||||| | | Sbjct 143367 TCTTGCGGTTGCAGTGGTCCTTGTACAGCATGAAGGGGTTGCCAGTCTCGGTCTGGGCCT 143426 Query 111402 TGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGT-TGGCCCGT-CCCTCCG 111458 ||| || || | ||| | | || ||| || | | | | | ||||| | ||||| Sbjct 143427 CGAGGATGGCATACCACAGCTTCTGCGCCTTG---AGCGTCTTGCGGCCCTTGCCCTCAC 143483 Query 111459 CCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTG 111518 ||||||||| ||| || || || |||||||| || ||| | || || || Sbjct 143484 GCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCGCCGTAGCAGTCCGCCAGGCCGGGGC 143543 Query 111519 CCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGT 111578 || || || || | || | ||| | || | |||||||||||||||||| |||| Sbjct 143544 ACTCGTTGGGGCACATGAGCGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATGAACAGGT 143603 Query 111579 CTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGA 111638 | || |||||||||| ||||| || | || ||| || | || ||||| Sbjct 143604 CCGGGATCCACAGGGCCAGGAAGAGGTCGCGGGCGCGGATCTCCTCCTTGCCGTGGTTCT 143663 Query 111639 GTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAG 111698 || | || |||||||| | | || |||||||||||||| || |||| || | || Sbjct 143664 TGCGCAGGTCGAGGAACTCGAACACGTCGGCGTGCCATGGCTCCAGGTAGATGGCAAAAG 143723 Query 111699 ATCC----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGA 111754 || | | | | ||| | || | |||||||| || ||| |||||| || || Sbjct 143724 CGCCGGGGCGCTTGTTG-CCACCCTGGTCGACATAGCGTGCCGTGTTGTTAAAAACACGC 143782 Query 111755 AGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGATTTATTGG 111812 ||||| || | || |||| || || || || || ||| || ||| ||| Sbjct 143783 AGCATGGGCACGATGCCATTGGAGGTGCCGTTGGTGCCGGCGATGTAGGAG--CCCGTGG 143840 Query 111813 CTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACT 111872 | | | ||||||| | || ||||| || ||| ||| || || ||||| Sbjct 143841 CACGAATGCGGTGGATGTTGAGGCCGATACCACCGGCCATCTTGGAAATCATGGCACAGG 143900 Query 111873 CCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAAC 111932 | | || || | |||||||| | ||| ||| ||||| || ||| |||||||| Sbjct 143901 TCTTGAGGGTGTCGTAGATACCATCGATGCTGTCGTCCTTCATGTCGACGAGGAAGCACG 143960 Query 111933 TGGACATCTGCGGTCT-TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAAC 111991 |||| ||| || || || || || || |||||||| || |||| ||||| |||| Sbjct 143961 ATGACAGCTG-GGCCTGGGGAGTGCCGGCGTTGAAGAGAGTGGGTGAGGCGTGGGTGAA- 144018 Query 111992 ATACCTTG--GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGA 112049 || |||| ||||| || ||| ||||| | || ||||||| || || || Sbjct 144019 GTA-CTTGCTCGACATGAGGTTGTACGTCTCGAGCACGCGCTCAATGTTGTCGCCCCAGA 144077 Query 112050 TGCCGATTGCGACCCGCATGAACATGTACTGTGGGGTTTCCATGAGGATGCCATCGAGCC 112109 |||||| ||||| ||||||| ||||| ||| ||| || | || |||| |||||| Sbjct 144078 TGCCGACAGCGACACGCATGATCATGTGCTGGGGGCGCTCGACGATCTTGCCGTCGAGC- 144136 Query 112110 GTTGA--AGATAGCTCTTCTCAAGGGTTTTGAGACCAAAGTA 112149 |||| || || ||| ||||| |||| |||||||| Sbjct 144137 -TTGAGCAGGTACGAGCGCTCCAGGGTCTTGAAGCCAAAGTA 144177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628030060951200