Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq48 187 3e-42 seq50 125 8e-24 >seq48 Length=300044 Score = 187 bits (206), Expect = 3e-42 Identities = 955/1497 (64%), Gaps = 33/1497 (2%) Strand=Plus/Minus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||| ||| ||||| ||||||| || || |||| || || || ||||||| || Sbjct 144112 CCCCCAGCACATGATCATGCGTGTCGCTGTCGGCATCTGGGGCGACAACATTGAGCGCGT 144053 Query 104281 CTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTC 104338 | ||||| ||| || ||||| |||| || |||| ||||| |||| || ||| Sbjct 144052 GCTCGAGACGTACAACCTCATGTCGAGCAAG-TAC-TTCACCCACGCCTCACCCACTCTC 143995 Query 104339 TTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 104398 ||||| || || || || |||| |||| |||||||| ||| || ||||| Sbjct 143994 TTCAACGCCGGCACTCCCCAGGCCCAGCTGTCATCGTGCTTCCTCGTCGACATGAAGGAC 143935 Query 104399 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 104458 ||| ||| | |||||||| | || || | | ||||| || || ||| ||| Sbjct 143934 GACAGCATCGATGGTATCTACGACACCCTCAAGACCTGTGCCATGATTTCCAAGATGGCC 143875 Query 104459 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-A 104516 || ||||| || | ||||||| | | |||| ||| || ||| || | Sbjct 143874 GGTGGTATCGGCCTCAACATCCACCGCATTCGTGCCACGGG--CTCCTACATCGCCGGCA 143817 Query 104517 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 104576 | || || || |||| || | || ||||| || || |||||| ||| || |||| Sbjct 143816 CCAACGGCACCTCCAATGGCATCGTGCCCATGCTGCGTGTTTTTAACAACACGGCACGCT 143757 Query 104577 ATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGG 104632 |||| | || | ||| | | | | || || | || |||| || ||||||||| Sbjct 143756 ATGTCGACCAGGGTGG-CAACAAGCGCCCCGGCGCTTTTGCCATCTACCTGGAGCCATGG 143698 Query 104633 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGG 104692 ||||| || | | |||||||| || |||| ||||| || | |||||| || Sbjct 143697 CACGCCGACGTGTTCGAGTTCCTCGACCTGCGCAAGAACCACGGCAAGGAGGAGATCCGC 143638 Query 104693 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 104752 |||||| |||||| || || ||||| || || || ||||||||| | |||||| || Sbjct 143637 GCCCGCGACCTCTTCCTGGCCCTGTGGATCCCGGACCTGTTCATGAAGCGGGTTGAGAAG 143578 Query 104753 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGT 104812 | ||| | ||| | ||| | || || || || || || || | || | || Sbjct 143577 AACGGCGACTGGACGCTCATGTGCCCCAACGAGTGCCCCGGCCTGGCGGACTGCTACGGC 143518 Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGG-TCGGGCGACTGCGACGGT 104871 |||||||| || || || ||| ||||||||| || || |||| | |||| | Sbjct 143517 GAGGAGTTCGAGGCTCTGTACGAGAAGTACGAGCGTGAGGGCAAGGGCCGC-AAGACGCT 143459 Query 104872 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 104930 | || || || | ||||| | || || ||| || | || ||||||||||| | || | Sbjct 143458 -CAAGGCGCAGAAGCTGTGGTATGCCATCCTCGAGGCCCAGACCGAGACTGGCAACCCCT 143400 Query 104931 ACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 104990 |||||| ||||| ||| ||| |||| ||||| || || ||||| |||| || Sbjct 143399 TCATGCTGTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGCACCATTC 143340 Query 104991 AGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 105050 || ||||| || || || || ||| | || | | | || ||| |||||||| Sbjct 143339 GCAGCTCCAACCTGTGCACCGAGATCATCGAGTACTCGGCGCCCGACGAGGTGGCTGTGT 143280 Query 105051 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA-TCCAGAGACAAAGACATTTGAT 105109 | ||||| || || | || || || ||| | | || | || || || | | || Sbjct 143279 GCAACCTGGCGTCGCTGGCGCTGCCGCAGTTTATCGACTACAACGAGGGAG-CCTACGAC 143221 Query 105110 TATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGAT 105169 | | || |||||||| || || | |||| ||||| |||| | || || Sbjct 143220 TTCCAGAAGCTCCACGAGGTGACCCAGGTTGTCGTTCGTAACCTTAACAAGATCATCGAC 143161 Query 105170 AGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGT 105229 || | ||||| || || ||||| || || ||| | ||| | || || || Sbjct 143160 GTCAACTACTACCCGGTCCAGGAGGCTCGCAACAGCAACATGCGCCACAGGCCCATCGGC 143101 Query 105230 CTCGGTGTTCAGGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTTGATTCCGA 105288 || || || |||||||| || |||| ||| | | || |||| | || || || Sbjct 143100 CTGGGCGTGCAGGGTCTGGCTGATGCCTTCCTGGCGCTG-CGCCTGCCCTTCGAGTCGCC 143042 Query 105289 CGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGA--G 105346 ||| || || |||| || || ||||||||||| || |||||||| | ||| | Sbjct 143041 CGAGGCTCGCGAGCTCAACAAGCAGATCTTTGAGACCATCTACCACGCCGC-CCTGACCG 142983 Query 105347 GCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCT 105406 | || | ||| |||| | | || | || || | ||||| || || | Sbjct 142982 CCTCGTGC-GAGCTGGCGCGTGAGCAGGGCACCTACTCGACGTACGAGGGCTCGCCTGTG 142924 Query 105407 TCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGA----GACCAAGCTTCACTACGA 105462 || || || | || || | || |||| |||| || | | | |||| || || Sbjct 142923 TCGCAGGGCATTCTGCAGTACGACATGT-GGAACGTCAAGCCGTCGGAGCT---CTGGGA 142868 Query 105463 CTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGC 105522 |||||| |||||||||| ||||||| || | ||| | || ||| || || |||| Sbjct 142867 CTGGGAGGCTCTCAAGGCCGACATCAAGCAGCACGGTGTGCGCAACTCGCTGCTTGTGGC 142808 Query 105523 TCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTA 105582 || ||||| |||||| ||| | || ||| |||| || || || ||||| || ||||| Sbjct 142807 GCCCATGCCCACAGCCAGCACGTCGCAGATCCTGGGCAACAACGAGTGCTTCGAGCCCTA 142748 Query 105583 CACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCA 105642 ||| | |||||||| | | | | ||||| || ||||| | | |||||| | Sbjct 142747 CACATCCAACATCTACCAGCGCCGCGTGCTCGCCGGCGAGTTCCAGGTCGTCAACCCGTG 142688 Query 105643 TCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCAT 105699 || | | ||||| ||| |||| || |||||| | | |||||| | | ||| Sbjct 142687 GCTGCTCAAGGACCTGGTCGAGCTTGGCCTGTGGTCCGACAACATGAAGAACCGCAT 142631 >seq50 Length=290317 Score = 125 bits (138), Expect = 8e-24 Identities = 164/226 (73%), Gaps = 6/226 (3%) Strand=Plus/Plus Query 94733 CAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAGT 94789 |||| || || || | ||||| || || |||||| |||||||| || || | |||| Sbjct 113093 CAGTCCCATGCATCCGTAAGAAGGCCGACTGGGCTCTGAAGTGGATTTCGGACAAGAAGT 113152 Query 94790 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 94849 || ||||||| ||||||| | || || || || ||||||||||||||| | Sbjct 113153 CGA---CCTTTGCCTCGCGACTCATTGCCTTCGCCGCCGTCGAGGGTATCTTCTTCAGCG 113209 Query 94850 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909 | |||| | |||| | ||||| |||||||| || || ||||| || || ||||| Sbjct 113210 GAGCCTTTGCCTCTATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCCGGCCTTACCTTCT 113269 Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 |||||||||| ||||||||||| ||||| || ||| || ||||| Sbjct 113270 CCAACGAGCTCATCTCTCGTGATGAGGGCCTGCACACCGACTTTGC 113315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583258999182280