Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq2 87.8 2e-12 >seq2 Length=2981670 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/206 (70%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 6506 GGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATGTGGTTCAGGTAG 6565 ||||| || |||||||| || | |||||| | || || |||| ||||| | |||| Sbjct 1776807 GGGAAGGGGCGGGGCTCGCGCTCGAGCTGGGTGCGCAGGGCGTCGACGTGGTCGACGTAG 1776866 Query 6566 ATATGCGCATCCCCCA--ACGTATGCACCAGCTCCCCAGGAACCAACCCCACGACATGAG 6623 | || || || |||| |||| | |||| ||| || || | | | | || | Sbjct 1776867 ACGTGGGCGTCGCCCATGACGTGGGT--CAGCGACCCGGGCACGAGGTCGCAGGCGTGGG 1776924 Query 6624 CGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCCATGT 6683 ||| ||||| ||| ||||| | ||| || || |||||||| ||||| || | ||||||| Sbjct 1776925 CGAGCATGTGCGTCAGCAGCGAGTAGCTCGCGATGTTGAAGGGCACGCCCAGGCCCATGT 1776984 Query 6684 CTCCCGATCGTTGATAGAGCTGGCAG 6709 | | || || || |||||||||||| Sbjct 1776985 CGCAGGACCGCTGGTAGAGCTGGCAG 1777010 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/206 (70%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695 |||||||||||| || || || | |||||||| | || ||||| |||||||| || || Sbjct 1777010 CTGCCAGCTCTACCAGCGGTCCTGCGACATGGGCCTGGGCGTGCCCTTCAACATCGCGAG 1776951 Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGT 34755 ||| | ||||| ||| ||||| |||| || | | | | || || ||| |||| Sbjct 1776950 CTACTCGCTGCTGACGCACATGCTCGCCCACGCCTGCGACCTCGTGCCCGGGTCGCTG-- 1776893 Query 34756 GCATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGATCCAG 34813 | |||| |||| || || || ||||| | ||||| |||| || || | |||| Sbjct 1776892 ACCCACGTCATGGGCGACGCCCACGTCTACGTCGACCACGTCGACGCCCTGCGCACCCAG 1776833 Query 34814 CTGCAACGAGAGCCCCGACCGTTCCC 34839 || | || |||||||| || ||||| Sbjct 1776832 CTCGAGCGCGAGCCCCGCCCCTTCCC 1776807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448261015989840