Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq2 118 8e-22 >seq2 Length=2981670 Score = 118 bits (130), Expect = 8e-22 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27106 GGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAG 27165 || ||||| | |||||| | ||||||||| || ||| | || ||||| || | |||| Sbjct 1776807 GGGAAGGGGCGGGGCTCGCGCTCGAGCTGGGTGCGCAGGGCGTCGACGTGGTCGACGTAG 1776866 Query 27166 ACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCC 27225 ||||| ||||| |||| | |||| | | || || | || || | |||| || Sbjct 1776867 ACGTGGGCGTCGCCCATGACGTGGGTCAGCGACCCGGGCACGAGGTCGCAGGCGTGGGCG 1776926 Query 27226 ATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCC 27285 | ||||| ||| || || |||||||| |||||||| ||||| || || || |||||||| Sbjct 1776927 AGCATGTGCGTCAGCAGCGAGTAGCTCGCGATGTTGAAGGGCACGCCCAGGCCCATGTCG 1776986 Query 27286 CCCGACCTCTGGTAGAGCTGACA 27308 | |||| |||||||||||| || Sbjct 1776987 CAGGACCGCTGGTAGAGCTGGCA 1777009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369506087667857