Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20erecta_20[genbank_20GCA_5F001651985.1_202016-05-25] 57 sequences; 34,747,975 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq6 152 6e-32 >seq6 Length=723466 Score = 152 bits (168), Expect = 6e-32 Identities = 445/678 (66%), Gaps = 8/678 (1%) Strand=Plus/Minus Query 54170 CCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAAC 54229 || || || ||||| || || ||||| | ||| | ||| ||||| || | || | | | Sbjct 215826 CCTGGGCGCTTGTTGCCGCCTTGATCGACGTAACGAGCAGTGTTGTTGAAGACACGGAGC 215767 Query 54230 ATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGA 54289 || || || | |||||||| | ||||||||| || | ||| ||| ||| |||||||| Sbjct 215766 ATAGGGATCAGGCCATTGGAGGTACCATTGGTGCCTGCGATGTAGGATCCTGTGGCACGA 215707 Query 54290 AT--ATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTT 54347 || | | ||||| |||| || || || || | || ||||| | ||||| | Sbjct 215706 ATGCAATGGGCATTGA--GACCAATACCTCCCGCTGTCTTGGAGATCATGGCGCAGGTCT 215649 Query 54348 TTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAG 54407 | | || || || |||||||| || || || || |||| | | | || || | Sbjct 215648 TGAGGGTGTCGTAAATGCCCTCGATGCTGTCTTCTTTCATATCTATCAAGAAGCACGATG 215589 Query 54408 ACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATT 54467 ||| |||| | || || || ||||| || | || || |||||||| || || || | Sbjct 215588 ACAATTGGGGTTGAGGTGTCCCGGCATTGAACAGAGTCGGCGAAGCGTGGGTGAAGCACT 215529 Query 54468 TTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTA 54527 | | || | ||||||||||||||||| || || | ||| | || || || | Sbjct 215528 TCTGGGACATAAGATTGTACGTCTCGATGGCCTTTTCAACATCATCTCCGTGGATGCCCA 215469 Query 54528 CTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG-TTGTTTATTTTCAGC 54586 | || |||||||| | |||||| || || | ||| | | |||| ||| || || || Sbjct 215468 CCGCCACACGCATCAGCATGTGTTGGGGCCGCTCAGC-AACTTGCTTGCCAATCTTGAGG 215410 Query 54587 AAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAA 54646 | ||| ||| | ||||| || || |||||||| || | ||| |||||||| || || Sbjct 215409 AGGTATGATCTCTCCAACGTCTTGAAACCAAAGTATTGGTAGTTGAAGTCTCGGTCATAG 215350 Query 54647 ATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATACTT-GA 54705 | ||| | ||||||| | || | | | || |||| || | | ||| || Sbjct 215349 ACAATGGCCGAGTTGAACTCGTCAGCGTGCCTCATGAC-ACATTCAAAGGTCTCCTTGGA 215291 Query 54706 AATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCATCAC 54765 ||| || || || |||| | || || || |||||||||| | | |||| | || Sbjct 215290 AATCATGGGGGAGGGTTTGTCGTTCTTCGGGTTGACATAGTGGTAGAGATCCGAGACTAC 215231 Query 54766 TTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAG 54825 | ||| | || || || | ||||| || ||||| ||||| || | || || || Sbjct 215230 GGAAGAGAATTGCTTCTTGGTCTGCTTGTGGAGGTTTGACACGGCGATACGGGCAGCGAG 215171 Query 54826 AATGGCATAATCCGGATG 54843 | ||| || |||||||| Sbjct 215170 GACGGCGTAGTCCGGATG 215153 Score = 82.4 bits (90), Expect = 9e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 53711 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 53770 || |||| ||| || || || ||||||| | | ||| |||| | |||||||||||| Sbjct 216285 GAGGCCAAATTGCACACAGCGACCTCATCGGGAGCCGTGTATTCGACAATCTCAGTGCAA 216226 Query 53771 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 53830 ||||| | |||||| || || || | || || |||||| ||| || |||||| Sbjct 216225 AGATTGGAGCTTCGGATGGTACCCAAGTTCTTCTGGTTGCTCTTTCGGTTGCAAGCATCC 216166 Query 53831 TTATAAAGAATGAATGGCGTACCAGTTTCAATCTG 53865 || || || ||| | || ||||| |||||| |||| Sbjct 216165 TTGTAGAGCATGTAGGGGGTACCGGTTTCAGTCTG 216131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721176973360