Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20erecta_20[genbank_20GCA_5F001651985.1_202016-05-25] 57 sequences; 34,747,975 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq12 136 4e-27 seq45 114 1e-20 seq1 105 7e-18 >seq12 Length=4193547 Score = 136 bits (150), Expect = 4e-27 Identities = 349/524 (67%), Gaps = 8/524 (2%) Strand=Plus/Minus Query 116847 GCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTATTCGACC--CT 116904 ||||| | | ||||| || ||||| || | |||||||| ||||| | || || Sbjct 1495070 GCTTCCAAAGATTTCAAGTCATGATGGAAAATATCCACTCGGAGATGTA--CAGCCTTCT 1495013 Query 116905 CATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGAC 116964 ||| ||||| |||||| | | | |||||| |||||| ||||| |||| || Sbjct 1495012 CATTGACACCTACGTGAAGGATCCCAAAGAGAAGACGTATTTGTTTGACGCCGTCGACAC 1494953 Query 116965 GATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGC 117024 || || || || |||| || || ||||| || | |||||| | | || |||| | Sbjct 1494952 AATCCCTTGTATCCGCAAGAAAGCGGACTGGGCTTTGAGATGGATCTCAGACAAAGAGTC 1494893 Query 117025 CGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAG 117084 ||| | | | || || ||||| ||||| || || || ||| ||||||| || || Sbjct 1494892 GAGCTTTGCCCAACGACTCGTGGCTTTCGCAGCTGTTGAAGGCATCTTCTTCTCTGGATC 1494833 Query 117085 TTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAA 117144 || || | || || |||||||||| || |||||||||||||| || ||| ||| Sbjct 1494832 CTTTGCATCTATCTTCTGGCTCAAGAGCAAGGGACTCATGCCCGGCCTCACCTTCTCCAA 1494773 Query 117145 CGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCA 117204 |||||||||||| | || |||||| |||| || ||||| ||| | ||| | | || Sbjct 1494772 CGAGCTCATCTCTCGTGATGAGGGTATGCACACGGATTTTGCTTGTCTCCTGATGCAACA 1494713 Query 117205 TTTGGTGCAGCGACCGAGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCAT 117264 | || ||| ||| | | | | | | || | ||||| |||||| || Sbjct 1494712 TCTGCAGCACAAGCCGGACCCACAACTCATTGAAAACATTATAACCGAAGCGGTCATGAT 1494653 Query 117265 CGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGT-GCGTCTGCTGGGACTCAATTGCGAAA 117323 || || ||||||||||| || || || || || | ||||||| | || | |||| Sbjct 1494652 TGAAAAGGAGTTCCTCACCGATGCTCTCCCCGTCGCAT-TGCTGGGCATGAACT-CGAAG 1494595 Query 117324 C-GATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCT 117366 | |||| || ||||| ||||| ||||| || | ||||| || Sbjct 1494594 CTCATGTGTCAGTACATTGAGTTTGTCGCTGATCGTCTGCTTCT 1494551 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || | || ||||| ||||||||| | || ||||| ||| | Sbjct 3447939 ATGCAGATTTTTGTCAAGACTTTGACTGGCAAGACCATCACCCTTGAGGTCGAGTCCAGC 3447998 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| || || | ||||| |||||||| ||| | || || Sbjct 3447999 GACACCATCGACAATGTCAAATCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGATCAA 3448058 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||||| || ||||| || || || |||| || || || | |||||||||| Sbjct 3448059 CAGCGCCTCATCTTTGCCGGCAAGCAACTCGAAGACGGCCGAACTCTGAGCGACTACAAC 3448118 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| ||| |||||||| || Sbjct 3448119 ATCCAGAAGGAGAGCACTCTGCATCTCGT 3448147 Score = 113 bits (124), Expect = 5e-20 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || || || ||||| || || || | || || ||| | | | Sbjct 3448167 ATGCAAATCTTTGTCAAGACTCTGACCGGCAAGACGATTACTCTGGAGGTTGAATCGAGC 3448226 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || || | ||||| ||||| ||||| | ||||| Sbjct 3448227 GACACCATCGACAACG-TCAAGAGCAAGATCCAAGACAAGGAGGGTATCCCACCCGACCA 3448285 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| || || | ||| || || ||| |||| |||| || || |||| |||||||| Sbjct 3448286 GCAACGTCTGATTTTCGCTGGAAAGCAGTTGGAGGACGGTCGTACGCTCAGTGACTACAA 3448345 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||| || ||||| |||| || ||||| || |||| Sbjct 3448346 CATTCAAAAGGAATCCACACTCCATCTTGTCCTGCG 3448381 Score = 100 bits (110), Expect = 3e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||||||||| || ||||| || || || || || ||||| |||| || || | | Sbjct 3448395 ATGCAAATATTTGTCAAAACTCTGACTGGAAAGACAATCACGCTCGAGGTAGAGAGCTCA 3448454 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | |||| ||||| || |||| ||||| |||||||| || ||||||| Sbjct 3448455 GATACGATCGACAACG-TCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCACCGGACCA 3448513 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | |||| || || || ||| |||| || | || || || |||||||| Sbjct 3448514 GCAGAGATTGATCTTTGCCGGTAAGCAGTTGGAGGATGGCCGAACACTGTCAGACTACAA 3448573 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 ||||||||||||| || || ||| | |||||| Sbjct 3448574 CATCCAGAAGGAGAGTACTCTTCATTTGGTGTTG 3448607 >seq45 Length=2675113 Score = 114 bits (126), Expect = 1e-20 Identities = 136/182 (75%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || ||||||||||| ||||||||| | || ||||| | |||||| | Sbjct 831565 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGACACGATC 831506 Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817 | |||| ||||| || || | ||||| || |||||||| | |||||||| || | Sbjct 831505 GACAACG-TCAAGTCCAAGATCCAAGACAAGGAAGGCATCCCGCCCGACCAGCAGCGCTT 831447 Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877 |||| ||| ||||| ||||| || || | || || || | |||||||||||||||||| Sbjct 831446 GATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGTACTCTGAGCGACTACAACATCCAGAA 831387 Query 40878 GG 40879 || Sbjct 831386 GG 831385 >seq1 Length=4892217 Score = 105 bits (116), Expect = 7e-18 Identities = 97/123 (79%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| || ||||| || ||||||||||||| || |||| ||| ||||| || || || Sbjct 3970729 GACAAGGAAGGCATTCCTCCGGACCAGCAACGCCTGATCTTCGCCGGCAAGCAACTCGAA 3970670 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 || | ||||| ||| ||||||||||||||||||||| |||| || || || || ||| Sbjct 3970669 GATGGCCGCACGCTCTCCGACTACAACATCCAGAAGGAATCCACCCTCCACCTCGTCTTG 3970610 Query 40903 CGC 40905 ||| Sbjct 3970609 CGC 3970607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218832906320