Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20erecta_20[genbank_20GCA_5F001651985.1_202016-05-25] 57 sequences; 34,747,975 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq12 138 1e-27 seq6 96.9 3e-15 >seq12 Length=4193547 Score = 138 bits (152), Expect = 1e-27 Identities = 148/196 (76%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || || |||||||| ||||||| ||| || || ||||| || || || || | Sbjct 3448130 CTCCTTCTGGATGTTGTAGTCGCTCAGAGTTCGGCCGTCTTCGAGTTGCTTGCCGGCAAA 3448071 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 |||||| ||||| |||||||| || |||||||||||||| || || ||| || | Sbjct 3448070 GATGAGGCGCTGTTGATCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGATTTGACATT 3448011 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| |||||| || ||||||||| | ||| | || ||||| |||| ||| || || Sbjct 3448010 GTCGATGGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCAGTCAAAGTCTTGAC 3447951 Query 118727 AAAAATCTGCATGGCT 118742 |||||||||||||||| Sbjct 3447950 AAAAATCTGCATGGCT 3447935 Score = 123 bits (136), Expect = 2e-23 Identities = 158/215 (73%), Gaps = 7/215 (3%) Strand=Plus/Minus Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590 |||| |||| ||| || || |||||||||||||| || || | || || ||||| | Sbjct 3448374 CAAGATGGAGTGTGGATTCCTTTTGAATGTTGTAGTCACTGAGCGTACGACCGTCCTCCA 3448315 Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650 ||| ||||||||| | || ||||| ||||| ||||| || || |||||||||||| | Sbjct 3448314 ACTGCTTTCCAGCGAAAATCAGACGTTGCTGGTCGGGTGGGATACCCTCCTTGTCTTGGA 3448255 Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTC---TCGACCTCGACGGTCACCGTTT 118707 | || || || | |||| |||||| |||| || ||||| | || | ||| | Sbjct 3448254 TCTTGCTCTTGACGTTGTCGATGGTGTC---GCTCGATTCAACCTCCAGAGTAATCGTCT 3448198 Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 ||||||||||||| || ||||| || |||||| || Sbjct 3448197 TGCCGGTCAGAGTCTTGACAAAGATTTGCATGCCT 3448163 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || || || | |||||||||||| || | ||| ||| || || |||||||| || | Sbjct 3448621 CCACCACGCAGTCTCAACACCAAATGAAGAGTACTCTCCTTCTGGATGTTGTAGTCTGAC 3448562 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | || || |||||| | ||| || || || |||| | | |||||| || || || Sbjct 3448561 AGTGTTCGGCCATCCTCCAACTGCTTACCGGCAAAGATCAATCTCTGCTGGTCCGGTGGA 3448502 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 |||||||||||||| ||| || || || | |||| || || | |||||| ||| Sbjct 3448501 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATCGTATCTGAGCTCTCTACC 3448442 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 |||| || | || || || ||||||||||| ||||| || |||||| Sbjct 3448441 TCGAGCGTGATTGTCTTTCCAGTCAGAGTTTTGACAAATATTTGCATG 3448394 >seq6 Length=723466 Score = 96.9 bits (106), Expect = 3e-15 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 133222 GGTTGACCACTTGAAACTCGCCGGCGAGAACGCGTCTGAGA-TATACATTCGACGTGAAC 133280 ||||||| ||||| || || |||||||| || || | |||| || | |||||||||| || Sbjct 216860 GGTTGACAACTTGGAATTCTCCGGCGAGGACACGGC-GAGAGTAGATATTCGACGTGTAC 216802 Query 133281 GGTTCGAAAGATTCGTTGTTGCCGAGTATCTGCGCCGTCGTCGCCGTGGGCATGTACGCC 133340 || ||||| |||||||||||||||| ||||| | |||| || || |||||| || Sbjct 216801 GGCTCGAAGCATTCGTTGTTGCCGAGGATCTGAGAAGTCGATGCAGTCGGCATGGGAGCG 216742 Query 133341 ACCAACAAAGAGTTTCTTACGCCGTACTTG 133370 || | | |||||| | || || || ||| Sbjct 216741 ACAAGAAGAGAGTTACGCACACCATATTTG 216712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830098623444