Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20erecta_20[genbank_20GCA_5F001651985.1_202016-05-25] 57 sequences; 34,747,975 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq12 123 3e-23 seq45 98.7 1e-15 >seq12 Length=4193547 Score = 123 bits (136), Expect = 3e-23 Identities = 159/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||| || | ||| | |||| ||||||||||| ||||| ||| || || || | Sbjct 3448382 ACGCAGGACAAGATGGAGTGTGGATTCCTTTTGAATGTTGTAGTCACTGAGCGTACGACC 3448323 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || | |||||| |||||||| || || || |||||||||| || | | |||||| Sbjct 3448322 GTCCTCCAACTGCTTTCCAGCGAAAATCAGACGTTGCTGGTCGGGTGGGATACCCTCCTT 3448263 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 ||| ||| || |||| ||| | | | |||||||||||||| || || | || | Sbjct 3448262 GTCTTGGATCTTGCTCTTGA-CGTTGTCGATGGTGTCGCTCGATTCAACCTCCAGAGTAA 3448204 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || ||||| || || ||||| |||||||||||||| Sbjct 3448203 TCGTCTTGCCGGTCAGAGTCTTGACAAAGATTTGCAT 3448167 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| | | ||| | || | ||||| ||||||||||| || || ||||| || | Sbjct 3448165 CCTCCACGGAGACGGAGGACGAGATGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 3448106 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| || |||| || || ||||| || || || ||||| ||||| || |||| || Sbjct 3448105 AGAGTTCGGCCGTCTTCGAGTTGCTTGCCGGCAAAGATGAGGCGCTGTTGATCGGGGGGA 3448046 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | || |||||||||| ||| || ||||| | | | |||||||| || || || Sbjct 3448045 ATGCCCTCCTTGTCCTGGATCTTGGATTTGACATTGTCGATGGTGTCGCTGGACTCGACC 3447986 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | |||||||| ||||| || | ||||| ||||| || ||||| Sbjct 3447985 TCAAGGGTGATGGTCTTGCCAGTCAAAGTCTTGACAAAAATCTGCAT 3447939 Score = 105 bits (116), Expect = 8e-18 Identities = 158/218 (72%), Gaps = 10/218 (5%) Strand=Plus/Minus Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030 |||||||||||| | || |||||||| || || ||||| || | ||| || || | || Sbjct 3448607 CAACACCAAATGAAGAGTACTCTCCTTCTGGATGTTGTAGTCTGACAGTGTTCGGCCATC 3448548 Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090 || | ||||||||| || || || | || ||||||||| | || | || ||||||||| Sbjct 3448547 CTCCAACTGCTTACCGGCAAAGATCAATCTCTGCTGGTCCGGTGGAATGCCCTCCTTGTC 3448488 Query 43091 CATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGTG 43145 | ||| | || | |||| ||| | | | ||| || |||| || || |||| |||| Sbjct 3448487 C-TGAATCTTCGACTTGA-CGTTGTCGATCGTATCTGAGCTC---TCTACCTCGAGCGTG 3448433 Query 43146 ATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || || || || || || || ||||| |||||||| Sbjct 3448432 ATTGTCTTTCCAGTCAGAGTTTTGACAAATATTTGCAT 3448395 >seq45 Length=2675113 Score = 98.7 bits (108), Expect = 1e-15 Identities = 133/183 (73%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| || || ||||| || |||||| || | || || |||||||| || ||||| | Sbjct 831385 CCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCTTCGAGCTGCTTGCCGGCGAAGA 831444 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113 | | ||||||||||||| ||| | || |||||||| ||| || |||| ||| | Sbjct 831445 TCAAGCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTTGGACTTGA-CGTTG 831503 Query 43114 -CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||||| ||| || || || | |||||||| |||||||| || ||||| || Sbjct 831504 TCGATCGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACG 831563 Query 43173 AAG 43175 ||| Sbjct 831564 AAG 831566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571817192579960