Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20erecta_20[genbank_20GCA_5F001651985.1_202016-05-25] 57 sequences; 34,747,975 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq12 113 3e-20 seq45 100 2e-16 >seq12 Length=4193547 Score = 113 bits (124), Expect = 3e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| || || ||||||||||| ||| ||| |||| ||||||||||| || ||||| Sbjct 3448358 TTCCTTTTGAATGTTGTAGTCACTGAGCGTACGACCGTCCTCCAACTGCTTTCCAGCGAA 3448299 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 ||| || || ||||||||| || | | ||||||||| ||||| ||| | | Sbjct 3448298 AATCAGACGTTGCTGGTCGGGTGGGATACCCTCCTTGTCTTGGATCTTGCTCTTGACGTT 3448239 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | | || | ||| ||||||| || |||| || || || |||||||| ||||| || || Sbjct 3448238 GTCGATGGTGTCGCTCGATTCAACCTCCAGAGTAATCGTCTTGCCGGTCAGAGTCTTGAC 3448179 Query 34378 AAAGATCTGCAT 34389 |||||| ||||| Sbjct 3448178 AAAGATTTGCAT 3448167 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| |||| ||||| || | |||||| || ||||| ||||||||||| ||| Sbjct 3448621 CCACCACGCAGTCTCAACACCAAATGAAGAGTACTCTCCTTCTGGATGTTGTAGTCTGAC 3448562 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || ||||||||||| || || || || | | ||||||||| || Sbjct 3448561 AGTGTTCGGCCATCCTCCAACTGCTTACCGGCAAAGATCAATCTCTGCTGGTCCGGTGGA 3448502 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | | | | |||| ||| | || || Sbjct 3448501 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATCGTATCTGAGCTCTCTACC 3448442 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||| || || || || |||||||| ||||| || ||||| Sbjct 3448441 TCGAGCGTGATTGTCTTTCCAGTCAGAGTTTTGACAAATATTTGCAT 3448395 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || || || | ||| || || ||||| |||||||||||| ||| ||| |||| Sbjct 3448150 AGGACGAGATGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTTCGGCCGTCT 3448091 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||||| || || ||||| ||||| || ||| ||| | || ||||||||| Sbjct 3448090 TCGAGTTGCTTGCCGGCAAAGATGAGGCGCTGTTGATCGGGGGGAATGCCCTCCTTGTCC 3448031 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| || | || | | || | ||| | || ||||| || | |||||||| Sbjct 3448030 TGGATCTTGGATTTGACATTGTCGATGGTGTCGCTGGACTCGACCTCAAGGGTGATGGTC 3447971 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGCT 34393 ||||| || | ||| || ||||| |||||||| ||| Sbjct 3447970 TTGCCAGTCAAAGTCTTGACAAAAATCTGCATGGCT 3447935 >seq45 Length=2675113 Score = 100 bits (110), Expect = 2e-16 Identities = 130/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 34202 TTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATG 34261 ||||| |||||||||||| ||| |||| | || || | ||||||||| ||||| || Sbjct 831387 TTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCTTCGAGCTGCTTGCCGGCGAAGATC 831446 Query 34262 AGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCT 34321 | |||||||||||| || | || |||||||| ||||| ||| | | | | Sbjct 831447 AAGCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCG 831506 Query 34322 ATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAG 34381 |||| |||| ||| ||||| || | |||||||| ||||| ||||| || || || ||| Sbjct 831507 ATCGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAG 831566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323071775565920