Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20erecta_20[genbank_20GCA_5F001651985.1_202016-05-25] 57 sequences; 34,747,975 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq6 432 3e-116 seq12 129 5e-25 seq45 98.7 9e-16 >seq6 Length=723466 Score = 432 bits (478), Expect = 3e-116 Identities = 1243/1896 (66%), Gaps = 39/1896 (2%) Strand=Plus/Minus Query 22104 TCTTG-TCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATG 22162 ||||| || || || ||||| || | | | ||| | ||||||| || || |||||| Sbjct 217209 TCTTGGTCGACAGTGAACTGAATAGGTTGCGTGGCGGCCATGGTGCGCAGGTAGTACATG 217150 Query 22163 CCCGTCTTCAGACCCATCTTCCA---CGCGTAAAAATGTATCGACGTCAATTTTCCATAA 22219 || ||||| |||||||| ||||| |||| || || || || | || || Sbjct 217149 CCAGTCTTGAGACCCATTTTCCAGCCCGCG---AAGTGCATGCTGGTGATCTTGCCCATG 217093 Query 22220 CTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCG 22279 | || | || || | |||| ||||| |||||| ||||| || || || || Sbjct 217092 GTTGGTTCCTTCAAGTGAATGTTGAGGGACTGGGACTGATCAATAAAGGCACCACGGTCC 217033 Query 22280 GCGGCCATATTTATCAATGTACGCATCGAC--ATTTCCCATACGGTCTTGTACAGTTGCC 22337 || ||||| | | | || || | | | |||||||| |||||||||||||| Sbjct 217032 GCCGCCATTTGCAGGACCGTCCG--TTGGCTGATTTCCCACACGGTCTTGTACAGAGCTT 216975 Query 22338 TGATCTCTAACGGTATCGATTCG-ATCCTCTGGACGGACCCGTTATTGTGTATGATCAAA 22396 |||| || || | || | | || | ||||| || ||| | | |||||| | Sbjct 216974 TGATGTCCGCAGGGA-CGTTGGGGATGTTTTGGACCGAGCCGCCGTCGGCGATGATCCGA 216916 Query 22397 TTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTC 22456 || || || ||||| ||||| || | | | | ||| || | ||| |||| Sbjct 216915 TTCTTCATGTTATCGGACCACAGGCCCAAGTCAACGAGATCCTTCAGCAGCCAGGGGTTG 216856 Query 22457 ACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCG 22516 || ||||| || || |||| | ||| ||||| ||| || || || ||| |||| ||| Sbjct 216855 ACAACTTGGAATTCTCCGGCGAGGACACGGCGAGAGTAGATATTCGACGTGTACGGCTCG 216796 Query 22517 AAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGT 22576 || |||| ||||| || || ||||||| ||||| || |||||||| || || | || Sbjct 216795 AAGCATTCGTTGTTGCCGAGGATCTGAGAAGTCGATGCAGTCGGCATGGGAGCGACAAGA 216736 Query 22577 AGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGA---CCAGTCCCAC 22633 || ||||| | || || | || | ||| | || || ||| ||| |||||| Sbjct 216735 AGAGAGTTACGCACACCATATTTGGCAATCTCGGCTTT---CAACGAGTCCCAATCCCAC 216679 Query 22634 AGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC--GCGACTCGCCG 22691 || ||||| || || ||||| ||||||||||||||| | | ||| |||| | | Sbjct 216678 AGGTCGGAGGGAGTGACATT---CCACATATCGTATTGAAGAATGCCCTGCGAAACT--G 216624 Query 22692 GGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCA 22751 ||||||| | ||| ||||| || | || | | || || ||||| || | Sbjct 216623 GGCTGCCCTGGTAGGTTTCATATGCTCCCTGCTCCTTTGCGAGCTCGCAAGAGGCAGTGA 216564 Query 22752 ACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTT 22811 ||| | | ||| || ||||| || |||| | || | || ||| || | Sbjct 216563 GAGCGGCATGATAAATGGTCTCAAAAATTTGGATATTGAGTTGTCGGGCCTCGGGAGAGT 216504 Query 22812 CGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCG 22871 || | || | ||||| | ||| || || || | |||||| || || | |||| | Sbjct 216503 CGAAGGGAAGACGCAGAGCAAGGAAGGCATCGGCAAGACCCTGGACTCCCAGGCCGACAG 216444 Query 22872 GTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTG 22931 |||||| | | || | || ||||| || | ||| || | || ||||| Sbjct 216443 GTCGGTGTCGGAAGTTGCTCTTCTTCGCCTCAGGGACAGGGTAGTAGTTGATGTCGATAA 216384 Query 22932 TTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAA 22991 || |||||| ||| | || |||| | || | | |||||||| Sbjct 216383 TTTTGTTCAGGTTGCGAGTGACAACCTGAGTAACCTCATGGAGACGACCGAAGTCGTATT 216324 Query 22992 CGCCC---GATTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCA 23048 | ||| | ||| | || || | || || | ||||| | |||||| || || | Sbjct 216323 CACCCCGAGCTTGGTCCACGAAGGTAGGGAGCGCCAGGGAGGCCAAATTGCACACAGCGA 216264 Query 23049 CCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGC 23108 |||| || | |||||| || ||||| || || || |||||| | || || | Sbjct 216263 CCTCATCGGGAGCCGTGTATTCGACAATCTCAGTGCAAAGATTGGAGCTTCGGATGGTAC 216204 Query 23109 CCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGC 23168 |||| || |||||||||| ||||| ||||| | |||||||||||||||||| || || | Sbjct 216203 CCAAGTTCTTCTGGTTGCTCTTTCGGTTGCAAGCATCCTTGTAGAGCATGTAGGGGGTAC 216144 Query 23169 CCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCA 23228 | || || ||| | ||||| ||| || ||| | |||| || | || ||| Sbjct 216143 CGGTTTCAGTCTGTGCCTCGAGGATGGCATACCATAGCTTCTGCGCCTTGACG-GTCTGG 216085 Query 23229 CGTAC-CTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAG 23287 || | | ||| || | ||| || | | ||||| ||||| || ||| | ||||| | Sbjct 216084 CGACCACGGCCCTCCTTCTCATATCTCTCGTACAGCGCGTTGAACTCGTCCCCGTAGACG 216025 Query 23288 TCGGCCAGGCCGGGCGATTGCATC-GGACACATGAGACTCCACATTGAGTCATTTTCAAC 23346 || || ||||| || | | ||| ||||| | ||| |||| | || || || || Sbjct 216024 TCAGCGAGGCCAGGTGCCT-CATGAGGACAGAAGAGTGTCCATTCTTGGTTCTTCTCGAC 215966 Query 23347 GCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTC 23406 ||| ||| || || || || |||| || ||||||||||| || || || | ||||| Sbjct 215965 ACGTTCCATGAACAGGTCGGGAGTCCACAGGGCGTAGAACAGGTCCCGCGCTCTGACCTC 215906 Query 23407 CTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTC 23466 ||||||||| |||||| | | | ||||||||| |||||||| || ||||| ||||| Sbjct 215905 TTCTTTGCCGTGGTTCTTCCTGAGGTTCAAAAAGTCAAACACGTCTGCGTGCCATGGCTC 215846 Query 23467 GAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGT 23526 ||| || | |||||| || || || | ||| |||||||| |||||||||||||| || || Sbjct 215845 GAGATAGATGGCAAAGGCACCTGGGCGCTTGTTGCCGCCTTGATCGACGTAACGAGCAGT 215786 Query 23527 GTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCAC 23586 ||||||| | || | ||||| || | || || ||||| | || ||| || | Sbjct 215785 GTTGTTGAAGACACGGAGCATAGGGATCAGGCCATTGGAGGTACCATTGGTGCCTGCGAT 215726 Query 23587 ACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGA 23646 || ||| | || |||| | || | | || ||| || ||||| | | || || Sbjct 215725 GTAGGATCCTGTGGCACGAATGCAATGGGCATTGAGACCAATACCTCCCGCTGTCTTGGA 215666 Query 23647 TATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGC 23706 ||||| ||||| || || |||||||| ||||||||||||||||| ||||| | | Sbjct 215665 GATCATGGCGCAGGTCTTGAGGGTGTCGTAAATGCCCTCGATGCTGTCTTCTTTCATATC 215606 Query 23707 GACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCT 23766 | |||||| ||||| |||| ||| | || || || |||| |||||| ||||| Sbjct 215605 TATCAAGAAGCACGATGACAATTGGGGTTGAGGTGTCCCGGCATTGAACAGAGTCGGCGA 215546 Query 23767 GGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTC 23826 ||||| || ||| | | ||||| ||||||||||| |||||||| |||| || Sbjct 215545 AGCGTGGGTGAAGCACTTCTGGGACATAAGATTGTACGTCTCGATGGCCTTTTCAACATC 215486 Query 23827 CTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTC--GACCGTG 23884 |||||||| || || | || || ||||||| ||||| ||| || | ||| | | || Sbjct 215485 ATCTCCGTGGATGCCCACCGCCACACGCATCAGCATGTGTTGGGGCCGCTCAGCAACTTG 215426 Query 23885 -ACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATA 23943 ||| ||| |||| || ||||| | | || ||| || || ||||| || | || Sbjct 215425 CTTGCC---AATCTTGAGGAGGTATGATCTCTCCAACGTCTTGAAACCAAAGTATTGGTA 215369 Query 23944 GTTAAAGTCACGATCGTGCACTATGGCCGAATTCAA 23979 ||| ||||| || || | || |||||||| || || Sbjct 215368 GTTGAAGTCTCGGTCATAGACAATGGCCGAGTTGAA 215333 >seq12 Length=4193547 Score = 129 bits (142), Expect = 5e-25 Identities = 160/216 (74%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| || || ||||||||||| ||||| ||||| || | || |||||| || Sbjct 3448166 CATGCAAATCTTTGTCAAGACTCTGACCGGCAAGACGATTACTCTGGAGGTTGAATCGAG 3448225 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAG-AATAGCG--GACAAGGAAGGCGTGCCGCCCGA 31308 ||||| |||| | ||||| ||| || | | |||||||| || | || ||||| Sbjct 3448226 CGACACCATCGACAACGTCAA---GAGCAAGATCCAAGACAAGGAGGGTATCCCACCCGA 3448282 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 |||||| ||||| || |||||||| || |||||||| ||| | || | || || || Sbjct 3448283 CCAGCAACGTCTGATTTTCGCTGGAAAGCAGTTGGAGGACGGTCGTACGCTCAGTGACTA 3448342 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||||||||| ||||| || || ||||| || || Sbjct 3448343 CAACATTCAAAAGGAATCCACACTCCATCTTGTCCT 3448378 >seq45 Length=2675113 Score = 98.7 bits (108), Expect = 9e-16 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261 ||||| ||||| || || ||||| || |||||| | || || || ||||||||| || Sbjct 831565 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGACACGATC 831506 Query 31262 GAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321 || | ||||| | || |||||||||||| | ||||||||||||||||| | Sbjct 831505 GACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGCATCCCGCCCGACCAGCAGCGCTTG 831446 Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380 || ||||| ||||| ||| | ||||| ||| ||||||| || ||||| || || Sbjct 831445 ATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGTACTCTGAGCGACTACAACATCCAGAA 831387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766082391440