Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20erecta_20[genbank_20GCA_5F001651985.1_202016-05-25] 57 sequences; 34,747,975 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq12 95.1 1e-14 >seq12 Length=4193547 Score = 95.1 bits (104), Expect = 1e-14 Identities = 260/395 (66%), Gaps = 15/395 (4%) Strand=Plus/Minus Query 52552 CCGTGTGTGCGCAAAAAGGATGATTGGGCATTGAAATGGATCGAAAACGACAAAG---CC 52608 || ||| | ||||| || | || ||||| |||| ||||||| | ||||||| | Sbjct 1494948 CCTTGTATCCGCAAGAAAGCGGACTGGGCTTTGAGATGGATCTCA---GACAAAGAGTCG 1494892 Query 52609 ACTTTTGCCGAACGTCTGGTCGCGTTTGCTATAGTGGAAGGTGTGtttttttCGGGTAGT 52668 | |||||| |||| || || || || || || ||||| | || || || || Sbjct 1494891 AGCTTTGCCCAACGACTCGTGGCTTTCGCAGCTGTTGAAGGCATCTTCTTCTCTGGATCC 1494832 Query 52669 TTTGCGGCAATATTTTACATCAAAACCTTGGGCATAATGCCCGGCCTCACGTTTAGCAAC 52728 ||||| | || || | |||| | | ||| | |||||||||||||| || |||| Sbjct 1494831 TTTGCATCTATCTTCTGGCTCAAGAGCAAGGGACTCATGCCCGGCCTCACCTTCTCCAAC 1494772 Query 52729 GAGTTGATATCGCGCGACGAAGGAATGCACACAGATTTTGCGTGTTTGTATTATAATACG 52788 ||| | || || || || || || |||||||| |||||||| |||| | | || | Sbjct 1494771 GAGCTCATCTCTCGTGATGAGGGTATGCACACGGATTTTGC----TTGTCTCCTGATGCA 1494716 Query 52789 CGCGTTAAAGAAAAATTGTCATATGAAAAA---ATTCTAGACATGTTTAAAGAGGCCGTC 52845 | || | || | | | | || ||| | |||| | | || || ||| Sbjct 1494715 ACATCTGCAGCACAA--GCCGGACCCACAACTCATTGAAAACATTATAACCGAAGCGGTC 1494658 Query 52846 GACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGCATGAACGCG 52905 |||||||| ||||| | || || ||| | ||||| ||||| ||||||||||| || Sbjct 1494657 ATGATTGAAAAGGAGTTCCTCACCGATGCTCTCCCCGTCGCATTGCTGGGCATGAACTCG 1494598 Query 52906 ACCATGATGTGCGAGTACATCGAGTTTGTTGCGGA 52940 | | ||||| ||||||| |||||||| || || Sbjct 1494597 AAGCTCATGTGTCAGTACATTGAGTTTGTCGCTGA 1494563 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || || | ||||| || | || | || || || ||||||||||| || || || Sbjct 3448394 GCCACCACGAAGACGCAGGACAAGATGGAGTGTGGATTCCTTTTGAATGTTGTAGTCACT 3448335 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | || | ||| || | ||| || ||||| | |||||||||||||| ||||| || Sbjct 3448334 GAGCGTACGACCGTCCTCCAACTGCTTTCCAGCGAAAATCAGACGTTGCTGGTCGGGTGG 3448275 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || || || ||||| ||| || || | | || | |||||| | | || || Sbjct 3448274 GATACCCTCCTTGTCTTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGCTCGATTCAAC 3448215 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | || | |||||||||||||| || || || || |||||||| Sbjct 3448214 CTCCAGAGTAATCGTCTTGCCGGTCAGAGTCTTGACAAAGATTTGCAT 3448167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063646554400