Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20erecta_20[genbank_20GCA_5F001651985.1_202016-05-25] 57 sequences; 34,747,975 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq12 122 7e-23 >seq12 Length=4193547 Score = 122 bits (134), Expect = 7e-23 Identities = 168/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941 ||| ||||||||||| ||||||||||| | ||| |||||||| || | ||||| || || Sbjct 3448622 GCCACCACGCAGTCTCAACACCAAATGAAGAGTACTCTCCTTCTGGATGTTGTAGTCTGA 3448563 Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001 || ||| || | || ||||| || || |||||||| ||||||| ||| || || | || Sbjct 3448562 CAGTGTTCGGCCATCCTCCAACTGCTTACCGGCAAAGATCAATCTCTGCTGGTCCGGTGG 3448503 Query 43002 CACACCTTCTTTTTCGCTG-ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTCG 43059 | || || || || ||| ||| | ||||| || | | || || ||| ||| Sbjct 3448502 AATGCCCTCCTTGTC-CTGAATCTTCGACTTGACGTTGTCGATCGTATC-TGAGCTCTCT 3448445 Query 43060 ACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || || | ||| || || ||||| || |||||||| ||||| |||||||| Sbjct 3448444 ACCTCGAGCGTGATTGTCTTTCCAGTCAGAGTTTTGACAAATATTTGCAT 3448395 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941 ||||||||| || | | || | ||| | |||||||||||| || | ||||| ||| Sbjct 3448166 GCCTCCACGGAGACGGAGGACGAGATGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCT 3448107 Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001 || || || |||| || | ||| ||||||||||| || | ||||||||||||| || Sbjct 3448106 CAGAGTTCGGCCGTCTTCGAGTTGCTTGCCGGCAAAGATGAGGCGCTGTTGATCGGGGGG 3448047 Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061 | || || || || |||| |||||| || | | ||||||| | |||||| Sbjct 3448046 AATGCCCTCCTTGTCCTGGATCTTGGATTTGACATTGTCGATGGTGTCGCTGGACTCGAC 3447987 Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || || || || || || | ||| || |||||||| ||||| Sbjct 3447986 CTCAAGGGTGATGGTCTTGCCAGTCAAAGTCTTGACAAAAATCTGCAT 3447939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381369335067306