Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20erecta_20[genbank_20GCA_5F001651985.1_202016-05-25] 57 sequences; 34,747,975 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq12 91.5 1e-13 >seq12 Length=4193547 Score = 91.5 bits (100), Expect = 1e-13 Identities = 294/450 (65%), Gaps = 11/450 (2%) Strand=Plus/Minus Query 50350 TGTGTGCGTAAAAAGGACGATTGGGCATTGAAATGGACTaaaaacaaaaaaCTTACTTTG 50409 ||| | || || || | || ||||| |||| ||||| | ||||| | | || Sbjct 1494945 TGTATCCGCAAGAAAGCGGACTGGGCTTTGAGATGGATCTCAGACAAAGAGTCGAGCTTT 1494886 Query 50410 GCCGAACGTTTAGTGGCGTTTGCCATAGTTGAAGGTGTGtttttttCCGGTAGCTTTGCA 50469 ||| |||| | ||||| || || |||||||| | || || || || ||||||| Sbjct 1494885 GCCCAACGACTCGTGGCTTTCGCAGCTGTTGAAGGCATCTTCTTCTCTGGATCCTTTGCA 1494826 Query 50470 GCCATATTTTACATTAAAACCTTAGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTG 50529 | || || | | || | | || | |||||||||||||| || ||||||| | Sbjct 1494825 TCTATCTTCTGGCTCAAGAGCAAGGGACTCATGCCCGGCCTCACCTTCTCCAACGAGCTC 1494766 Query 50530 ATTTCGCGCGACGAAGGAATGCACACAGACTTTGCGTGTTTG-TACTACAATACGCGCGT 50588 || || || || || || |||||||| || ||||| ||| | | | ||| | || Sbjct 1494765 ATCTCTCGTGATGAGGGTATGCACACGGATTTTGCTTGTCTCCTGATGCAACATCTGCA- 1494707 Query 50589 AAATGAAAAATTATCATACGAAACA-ATTTTGGACATGTTCAAAGAAGCCGTCGACATCG 50647 | | || | | ||| ||| |||| | | ||||| ||| || | Sbjct 1494706 ----GCACAAGCCGGACCCACAACTCATTGAAAACATTATAACCGAAGCGGTCATGATTG 1494651 Query 50648 AAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGCATGAACGCAGACATGA 50707 |||| ||||| |||| || ||| | ||||| |||||| ||||||||||| | | | | Sbjct 1494650 AAAAGGAGTTCCTCACCGATGCTCTCCCCGTCGCATTGCTGGGCATGAACTCGAAGCTCA 1494591 Query 50708 TGTGCGAGTACATTGAGTTTGTTGCAGACAGATTG-TTGTTGCAGCTGGGACAAC-CGAA 50765 |||| |||||||||||||||| || || | || || |||| || || |||| | Sbjct 1494590 TGTGTCAGTACATTGAGTTTGTCGCTGATCGTCTGCTTCTTGC--CTTGGGCAACAAGCG 1494533 Query 50766 ATACTATAATGCACGTAACCCCTTTCCGTT 50795 ||||| ||||||| ||||| || || || Sbjct 1494532 ATACTTCAATGCACAAAACCCGTTCCCATT 1494503 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 142994 TCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAG 143053 || || || |||||||| ||||||| || | |||||||||||| || || ||| || Sbjct 3448129 TCCTTCTGGATGTTGTAGTCGCTCAGAGTTCGGCCGTCTTCGAGTTGCTTGCCGGCAAAG 3448070 Query 143054 ATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGT 143113 || || || || |||||||| || ||||| || ||||| || || ||| | | Sbjct 3448069 ATGAGGCGCTGTTGATCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGATTTGACATTG 3448010 Query 143114 TCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACG 143173 || | ||||| ||| || || |||| || | |||||||| ||||| || || || Sbjct 3448009 TCGATGGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCAGTCAAAGTCTTGACA 3447950 Query 143174 AATATTTGCATAGCT 143188 || || ||||| ||| Sbjct 3447949 AAAATCTGCATGGCT 3447935 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 ||| || || | ||||| || | ||| | ||| ||||| ||||| |||||||| || || Sbjct 3448394 GCCACCACGAAGACGCAGGACAAGATGGAGTGTGGATTCCTTTTGAATGTTGTAGTCACT 3448335 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | || | ||| || | || || ||||| | |||||||||||||| ||||| || Sbjct 3448334 GAGCGTACGACCGTCCTCCAACTGCTTTCCAGCGAAAATCAGACGTTGCTGGTCGGGTGG 3448275 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || || || ||||| || || || | | || | ||||| | | ||| || Sbjct 3448274 GATACCCTCCTTGTCTTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGCTCGATTCAAC 3448215 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | ||| | |||||||||||||| || || || || |||||||| Sbjct 3448214 CTCCAGAGTAATCGTCTTGCCGGTCAGAGTCTTGACAAAGATTTGCAT 3448167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507014038752240