Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20erecta_20[genbank_20GCA_5F001651985.1_202016-05-25] 57 sequences; 34,747,975 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq3 140 2e-28 seq12 96.9 2e-15 >seq3 Length=1049705 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 4166 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 4107 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 4106 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 4072 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 12041 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 11982 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 11981 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 11947 >seq12 Length=4193547 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | || | |||||||||||||||||| |||||||| || || ||||| || ||| Sbjct 3448621 CCACCACGCAGTCTCAACACCAAATGAAGAGTACTCTCCTTCTGGATGTTGTAGTCTGAC 3448562 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | || | || || || || || |||||||| || | | || || || | || Sbjct 3448561 AGTGTTCGGCCATCCTCCAACTGCTTACCGGCAAAGATCAATCTCTGCTGGTCCGGTGGA 3448502 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||| || |||||| ||| || ||| || || | || |||||| || || || Sbjct 3448501 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATCGTATCTGAGCTCTCTACC 3448442 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || | || || || || || |||| ||||| || ||||| |||||| Sbjct 3448441 TCGAGCGTGATTGTCTTTCCAGTCAGAGTTTTGACAAATATTTGCATG 3448394 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 38114 ATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTG 38173 ||| |||||||||||||| || || ||||| || || | || |||| || | ||| Sbjct 3448142 ATGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTTCGGCCGTCTTCGAGTTG 3448083 Query 38174 TTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTT 38233 || |||||||| || ||||| |||||||||| ||| | ||| || |||||| || || Sbjct 3448082 CTTGCCGGCAAAGATGAGGCGCTGTTGATCGGGGGGAATGCCCTCCTTGTCCTGGATCTT 3448023 Query 38234 TTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGT 38293 || ||||| | || || || | || || || | || || || || || || Sbjct 3448022 GGATTTGACATTGTCGATGGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCAGT 3447963 Query 38294 CAAGGTTTTCACGAATATCTGCATG 38318 ||| || || || || ||||||||| Sbjct 3447962 CAAAGTCTTGACAAAAATCTGCATG 3447938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334946967316367