Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20erecta_20[genbank_20GCA_5F001651985.1_202016-05-25] 57 sequences; 34,747,975 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq12 136 3e-27 >seq12 Length=4193547 Score = 136 bits (150), Expect = 3e-27 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || ||| | ||||| || ||| | ||||| || || ||| | | | Sbjct 3448167 ATGCAAATCTTTGTCAAGACTCTGACCGGCAAGACGATTACTCTGGAGGTTGAATCGAGC 3448226 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || || ||||||||||||||||| |||||||| || Sbjct 3448227 GACACCATCGACAACGTCAAGAGCAAGATCCAAGACAAGGAGGGTATCCCACCCGACCAG 3448286 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || || || || || ||||| ||||| || || || || |||||| Sbjct 3448287 CAACGTCTGATTTTCGCTGGAAAGCAGTTGGAGGACGGTCGTACGCTCAGTGACTACAAC 3448346 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433 |||||||| |||||||| | ||| | || |||| Sbjct 3448347 ATTCAAAAGGAATCCACACTCCATCTTGTCCTGCG 3448381 Score = 120 bits (132), Expect = 3e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| || ||||| || || || || |||| ||||| || || ||| | Sbjct 3447939 ATGCAGATTTTTGTCAAGACTTTGACTGGCAAGACCATCACCCTTGAGGTCGAGTCCAGC 3447998 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || ||||| || || || ||||||||||| ||||| ||||||||| Sbjct 3447999 GACACCATCGACAATGTCAAATCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGATCAA 3448058 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||||||||| || | || || ||| || | ||| |||||| Sbjct 3448059 CAGCGCCTCATCTTTGCCGGCAAGCAACTCGAAGACGGCCGAACTCTGAGCGACTACAAC 3448118 Query 22399 ATTCAAAAAGA 22409 || || || || Sbjct 3448119 ATCCAGAAGGA 3448129 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| |||||| | || || || || |||| || || || || | | | Sbjct 3448395 ATGCAAATATTTGTCAAAACTCTGACTGGAAAGACAATCACGCTCGAGGTAGAGAGCTCA 3448454 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | ||| | |||| || ||||| ||||||||||| |||||||| || || Sbjct 3448455 GATACGATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCACCGGACCAG 3448514 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || |||||||| || ||||| |||||| ||| || | || || |||||| Sbjct 3448515 CAGAGATTGATCTTTGCCGGTAAGCAGTTGGAGGATGGCCGAACACTGTCAGACTACAAC 3448574 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || || | ||||| || ||| || |||| || || Sbjct 3448575 ATCCAGAAGGAGAGTACTCTTCATTTGGTGTTGAGACTGCGTGGTGG 3448621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727708420205