Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20erecta_20[genbank_20GCA_5F001651985.1_202016-05-25] 57 sequences; 34,747,975 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq12 154 3e-32 seq45 147 4e-30 seq1 122 2e-22 >seq12 Length=4193547 Score = 154 bits (170), Expect = 3e-32 Identities = 175/235 (74%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286 |||| | || || || || | ||| ||||| || || || ||| || |||||||| | Sbjct 3448629 TTTACTGGCCACCACGCAGTCTCAACACCAAATGAAGAGTACTCTCCTTCTGGATGTTGT 3448570 Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346 | || || ||||| | ||||| || |||||||| ||||| || || | ||| || |||| Sbjct 3448569 AGTCTGACAGTGTTCGGCCATCCTCCAACTGCTTACCGGCAAAGATCAATCTCTGCTGGT 3448510 Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406 | ||||||||||| |||||||| |||||||| | ||||||| ||||| || |||| Sbjct 3448509 CCGGTGGAATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATCGTATCTGAGC 3448450 Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| || | ||||| || ||||| || || || ||||| ||||| ||||| Sbjct 3448449 TCTCTACCTCGAGCGTGATTGTCTTTCCAGTCAGAGTTTTGACAAATATTTGCAT 3448395 Score = 143 bits (158), Expect = 5e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| |||| || | || || ||||| || ||||| ||||| || || | Sbjct 3448393 CCACCACGAAGACGCAGGACAAGATGGAGTGTGGATTCCTTTTGAATGTTGTAGTCACTG 3448334 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || |||||||| || ||||| || || | ||| ||||||||||| Sbjct 3448333 AGCGTACGACCGTCCTCCAACTGCTTTCCAGCGAAAATCAGACGTTGCTGGTCGGGTGGG 3448274 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 || || ||||||||||| ||||| ||||||| ||||||||||| ||| ||||| || Sbjct 3448273 ATACCCTCCTTGTCTTGGATCTTGCTCTTGACGTTGTCGATGGTGTC-GCTCGATTCAAC 3448215 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| || || || || || || || |||||||| || || ||||| Sbjct 3448214 CTCCAGAGTAATCGTCTTGCCGGTCAGAGTCTTGACAAAGATTTGCAT 3448167 Score = 129 bits (142), Expect = 1e-24 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| || || || | || | || || ||| ||| || |||||||| || ||| Sbjct 3448165 CCTCCACGGAGACGGAGGACGAGATGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 3448106 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || ||||| | ||||| ||||| || ||||| | ||||| ||||| ||| Sbjct 3448105 AGAGTTCGGCCGTCTTCGAGTTGCTTGCCGGCAAAGATGAGGCGCTGTTGATCGGGGGGA 3448046 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 ||||| |||||||| || ||||| | ||||| ||||||||||| ||| || || || Sbjct 3448045 ATGCCCTCCTTGTCCTGGATCTTGGATTTGACATTGTCGATGGTGTC-GCTGGACTCGAC 3447987 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| || || || | |||||||| || |||||||| Sbjct 3447986 CTCAAGGGTGATGGTCTTGCCAGTCAAAGTCTTGACAAAAATCTGCAT 3447939 >seq45 Length=2675113 Score = 147 bits (162), Expect = 4e-30 Identities = 140/179 (78%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||| || || | |||||||| | |||||| |||||||| || Sbjct 831387 TTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCTTCGAGCTGCTTGCCGGCGAAGATC 831446 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 | | || |||||||| || ||||||||||||||||| ||||| | ||||||| ||| Sbjct 831447 AAGCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCG 831506 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 || ||||| | || || || || | ||||||||| || |||||||||||||||||||| Sbjct 831507 ATCGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 831565 >seq1 Length=4892217 Score = 122 bits (134), Expect = 2e-22 Identities = 108/135 (80%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| |||||||| || | ||| || ||||| || || |||||||| || |||||| Sbjct 3970596 CCACCGCGGAGGCGCAAGACGAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAG 3970655 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | ||||| |||||||| || || | ||| ||||| || ||| Sbjct 3970656 AGCGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCCGGAGGA 3970715 Query 68355 ATGCCTTCCTTGTCT 68369 ||||||||||||||| Sbjct 3970716 ATGCCTTCCTTGTCT 3970730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621743344040